RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 RNF10Q8N5U6 811 aaKnown RBP14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 SPATA22Q8NHS9 363 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 NUS1Q96E22 293 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 IMP4Q96G21 291 aaKnown RBP14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 TEKT5Q96M29 485 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 WDR92Q96MX6 357 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 MCCC1Q96RQ3 725 aaPredicted RBP14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 HERPUD2Q9BSE4 406 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 MLPHQ9BV36 600 aaPredicted RBP14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 TSGA10Q9BZW7 698 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 STRADBQ9C0K7 418 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 TCEAL2Q9H3H9 227 aaPredicted RBP14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 GOLGA6AQ9NYA3 693 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 UBP1Q9NZI7 540 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 KLQ9UEF7 1012 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 CD84Q9UIB8 345 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 EFR3BQ9Y2G0 817 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 HELZ2Q9BYK8 2649 aaKnown RBP14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 ATMQ13315 3056 aa14.03□□□□□ -0.16
CCHCR1-211ENST00000467553 CDRT15L2A8MXV6 281 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 MIF4GDA9UHW6 222 aaKnown RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 ANKRD66B4E2M5 251 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 F5H423 210 aaPredicted RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 APOC4-APOC2K7ER74 178 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 PSMD11O00231 422 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 CACNB4O00305 520 aaPredicted RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 MTSS1O43312 755 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 TJP3O95049 919 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 CLDN7O95471 211 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 MT-CYBP00156 380 aaPredicted RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 APOC2P02655 101 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 RBL1P28749 1068 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 TRIM23P36406 574 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 RPL26P61254 145 aaKnown RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 OTUD4Q01804 1114 aaKnown RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 PTSQ03393 145 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 WASHC5Q12768 1159 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 XRCC4Q13426 336 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 GALNT3Q14435 633 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 QPCTQ16769 361 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 ALG11Q2TAA5 492 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 C3orf38Q5JPI3 329 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 PERM1Q5SV97 790 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 LRRC66Q68CR7 880 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 RFLNAQ6ZTI6 216 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 PELI3Q8N2H9 469 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 ACTL9Q8TC94 416 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 HTR3CQ8WXA8 447 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 FUBP1Q96AE4 644 aaKnown RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 TMEM159Q96B96 161 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 ATXN7L3BQ96GX2 97 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 PRR11Q96HE9 360 aaPredicted RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 FAM118BQ9BPY3 351 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 ADGRE3Q9BY15 652 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 KLHL8Q9P2G9 620 aaPredicted RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 MOSPD1Q9UJG1 213 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 PNMA8BQ9ULN7 279 aaPredicted RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 RPL26L1Q9UNX3 145 aaKnown RBP14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 CAPN6Q9Y6Q1 641 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 LRP4O75096 1905 aa14.02□□□□□ -0.17
CCHCR1-211ENST00000467553 DDX3YO15523 660 aaKnown RBP14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 KLK10O43240 276 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 NRDCO43847 1150 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 PMPCBO75439 489 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 ITGA2BP08514 1039 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 NFKB1P19838 968 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 CD68P34810 354 aaPredicted RBP14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 PTPN7P35236 360 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 EIF3EP60228 445 aaKnown RBP14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 CDK18Q07002 472 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 VAC14Q08AM6 782 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 PEX6Q13608 980 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 NOMO1Q15155 1222 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 TCEA2Q15560 299 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 CCDC70Q6NSX1 233 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 DARS2Q6PI48 645 aaKnown RBP14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 OGFOD3Q6PK18 319 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 NYAP1Q6ZVC0 841 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 TECPR1Q7Z6L1 1165 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 ZNF567Q8N184 647 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 OR56A4Q8NGH8 313 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 DTD2Q96FN9 168 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 TMEM74Q96NL1 305 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 QKIQ96PU8 341 aaKnown RBP eCLIP14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 GFM1Q96RP9 751 aaKnown RBP14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 LZTFL1Q9NQ48 299 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 GULP1Q9UBP9 304 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 APPL1Q9UKG1 709 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 GPR34Q9UPC5 381 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 PCDHGA7Q9Y5G6 932 aa14.01□□□□□ -0.17
CCHCR1-211ENST00000467553 C1orf232A0A0U1RR37 186 aa14□□□□□ -0.17
CCHCR1-211ENST00000467553 GOLGA6L9A6NEM1 432 aa14□□□□□ -0.17
CCHCR1-211ENST00000467553 TMEM202A6NGA9 273 aa14□□□□□ -0.17
CCHCR1-211ENST00000467553 ZW10O43264 779 aa14□□□□□ -0.17
CCHCR1-211ENST00000467553 CCDC175P0C221 793 aa14□□□□□ -0.17
CCHCR1-211ENST00000467553 RBP3P10745 1247 aa14□□□□□ -0.17
CCHCR1-211ENST00000467553 GLB1P16278 677 aa14□□□□□ -0.17
CCHCR1-211ENST00000467553 ZNF30P17039 623 aa14□□□□□ -0.17
CCHCR1-211ENST00000467553 CCKBRP32239 447 aa14□□□□□ -0.17
CCHCR1-211ENST00000467553 GPR1P46091 355 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms