RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 VPS13AQ96RL7 3174 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 FAM237BA0A1B0GVD1 139 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 GOLGA8CPA6NN73 597 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 E7ESA3 106 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 H0Y8X5 98 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 GAPDHSO14556 408 aaPredicted RBP15.91■□□□□ 0.14
GPC1-207ENST00000466624 EIF3HO15372 352 aaKnown RBP eCLIP15.91■□□□□ 0.14
GPC1-207ENST00000466624 WNT1P04628 370 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 THEGLP0DJG4 465 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 KIAA1024LP59773 190 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 XIAPP98170 497 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 PTPRCAPQ14761 206 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 FNBP1LQ5T0N5 605 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 ZDHHC24Q6UX98 284 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 CCNJLQ8IV13 435 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 PELI3Q8N2H9 469 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 LRRN4CLQ8ND94 238 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 OR13H1Q8NG92 308 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 OR13J1Q8NGT2 312 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 FBXO25Q8TCJ0 367 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 CDKN2AIPNLQ96HQ2 116 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 SGSM3Q96HU1 749 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 APOOQ9BUR5 198 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 SPATA16Q9BXB7 569 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 WDR26Q9H7D7 661 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 FKBPLQ9UIM3 349 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 SLC6A14Q9UN76 642 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 MYO15AQ9UKN7 3530 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 TMEM131Q92545 1883 aa15.91■□□□□ 0.14
GPC1-207ENST00000466624 GPR179Q6PRD1 2367 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 ESYT3A0FGR9 886 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 AGAP14A8MT82 685 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 FADS2P1A8MWK0 482 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 K7ESM1 405 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 TLR4O00206 839 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 MYCLP1P12525 358 aaPredicted RBP15.9■□□□□ 0.14
GPC1-207ENST00000466624 CSNK1EP49674 416 aaKnown RBP15.9■□□□□ 0.14
GPC1-207ENST00000466624 PLTPP55058 493 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 NXPH1P58417 271 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 CRADDP78560 199 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 CDK3Q00526 305 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 DHX9Q08211 1270 aaKnown RBP15.9■□□□□ 0.14
GPC1-207ENST00000466624 PEX6Q13608 980 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 PTK2BQ14289 1009 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 TRADDQ15628 312 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 ALS2CLQ60I27 953 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 Q6ZSR6 202 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 PTAR1Q7Z6K3 402 aaPredicted RBP15.9■□□□□ 0.14
GPC1-207ENST00000466624 TMEM135Q86UB9 458 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 HEATR4Q86WZ0 1026 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 AGGF1Q8N302 714 aaeCLIP15.9■□□□□ 0.14
GPC1-207ENST00000466624 MPP5Q8N3R9 675 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 FUBP1Q96AE4 644 aaKnown RBP15.9■□□□□ 0.14
GPC1-207ENST00000466624 COX14Q96I36 57 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 ZNF778Q96MU6 729 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 AGAP2Q99490 1192 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 EBNA1BP2Q99848 306 aaKnown RBP15.9■□□□□ 0.14
GPC1-207ENST00000466624 ZDHHC5Q9C0B5 715 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 GDF3Q9NR23 364 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 PHPT1Q9NRX4 125 aaPredicted RBP15.9■□□□□ 0.14
GPC1-207ENST00000466624 ZDHHC18Q9NUE0 388 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 SMOXQ9NWM0 555 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 NCDNQ9UBB6 729 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 ADAMTS9Q9P2N4 1935 aa15.9■□□□□ 0.14
GPC1-207ENST00000466624 SPTY2D1-AS1A0A0U1RR47 76 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 CACNB4O00305 520 aaPredicted RBP15.89■□□□□ 0.13
GPC1-207ENST00000466624 FOXD2O60548 495 aaPredicted RBP15.89■□□□□ 0.13
GPC1-207ENST00000466624 SRP72O76094 671 aaKnown RBP15.89■□□□□ 0.13
GPC1-207ENST00000466624 USP1O94782 785 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 PRAMEF1O95521 474 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 TTC4O95801 387 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 ZNF806P0C7X5 589 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 PGAM1P18669 254 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 KELP23276 732 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 HTR1BP28222 390 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 THOP1P52888 689 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 C21orf59P57076 290 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 CUL1Q13616 776 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 NFATC4Q14934 902 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 BBS9Q3SYG4 887 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 GPR33Q49SQ1 333 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 MSS51Q4VC12 460 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 TRIM61Q5EBN2 209 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 KIAA0930Q6ICG6 404 aaPredicted RBP15.89■□□□□ 0.13
GPC1-207ENST00000466624 CASC4Q6P4E1 433 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 FAM151BQ6UXP7 276 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 MACC1Q6ZN28 852 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 CENPUQ71F23 418 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 SNX20Q7Z614 316 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 IFT20Q8IY31 132 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 SLC22A18ASQ8N1D0 253 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 RUBCNQ92622 972 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 STAMBPL1Q96FJ0 436 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 HIC2Q96JB3 615 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 TBATAQ96M53 351 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 NUSAP1Q9BXS6 441 aaKnown RBP15.89■□□□□ 0.13
GPC1-207ENST00000466624 ERVMER34-1Q9H9K5 563 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 CNOT6Q9ULM6 557 aaKnown RBP15.89■□□□□ 0.13
GPC1-207ENST00000466624 ANKRD6Q9Y2G4 727 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 OR1A2Q9Y585 309 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms