RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 UGT2A3Q6UWM9 527 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 TEX26Q8N6G2 289 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 MDGA1Q8NFP4 955 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 RAET1EQ8TD07 263 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 TM6SF2Q9BZW4 377 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 CD274Q9NZQ7 290 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 IGLV3-10A0A075B6K4 115 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 SLC38A8A6NNN8 435 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 SLC22A2O15244 555 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 ACSL4O60488 711 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 RPLP2P05387 115 aaKnown RBP16.29■□□□□ 0.2
SLX4-202ENST00000466154 ATF6P18850 670 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 SLC11A2P49281 568 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 NRG1Q02297 640 aaPredicted RBP16.29■□□□□ 0.2
SLX4-202ENST00000466154 SEMG2Q02383 582 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 CLCQ05315 142 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 PLA2G4EQ3MJ16 856 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 PSAPL1Q6NUJ1 521 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 LARP4Q71RC2 724 aaKnown RBP eCLIP16.29■□□□□ 0.2
SLX4-202ENST00000466154 DHFR2Q86XF0 187 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 FUNDC1Q8IVP5 155 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 PIANPQ8IYJ0 282 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 FEM1CQ96JP0 617 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 AARSD1Q9BTE6 412 aaKnown RBP16.29■□□□□ 0.2
SLX4-202ENST00000466154 SPATA16Q9BXB7 569 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 SEPT3Q9UH03 358 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 SYN3O14994 580 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 SNX2O60749 519 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 AOC2O75106 756 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 FESP07332 822 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 CORO1AP31146 461 aaKnown RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 MC4RP32245 332 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 TIAL1Q01085 375 aaKnown RBP eCLIP16.28■□□□□ 0.2
SLX4-202ENST00000466154 RAD51Q06609 339 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 ZNF177Q13360 481 aaPredicted RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 SPOUT1Q5T280 376 aaKnown RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 RNF219Q5W0B1 726 aaPredicted RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 CARNMT1Q8N4J0 409 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 CANT1Q8WVQ1 401 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 SCLYQ96I15 445 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 DNMT3LQ9UJW3 386 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 PRRC2BQ5JSZ5 2229 aaKnown RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 C2orf81A6NN90 581 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 AHCYL1O43865 530 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 KATNA1O75449 491 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 ECI2O75521 394 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 SEC24DO94855 1032 aaPredicted RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 DNAJB1P25685 340 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 DEFB128Q7Z7B8 93 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 MIER2Q8N344 545 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 AGO1Q9UL18 857 aaKnown RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 STX7O15400 261 aaKnown RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 MTHFD2P13995 350 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 HOXD9P28356 352 aaPredicted RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 CCL23P55773 120 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 YBEYP58557 167 aaPredicted RBP16.28■□□□□ 0.2
SLX4-202ENST00000466154 UGT3A1Q6NUS8 523 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 CHSY3Q70JA7 882 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 LRRC8DQ7L1W4 858 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 CPNE9Q8IYJ1 553 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 CDYL2Q8N8U2 506 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 PCYOX1LQ8NBM8 494 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 STAG3L4Q8TBR4 150 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 CAAP1Q9H8G2 361 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 RAI2Q9Y5P3 530 aa16.28■□□□□ 0.2
SLX4-202ENST00000466154 OR6C75A6NL08 312 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 DRGXA6NNA5 263 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 GUCA1CO95843 209 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 BMP1P13497 986 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 PSMC3P17980 439 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 CAPN3P20807 821 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 RPL10P27635 214 aaKnown RBP16.27■□□□□ 0.2
SLX4-202ENST00000466154 XIAPP98170 497 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 PLOD1Q02809 727 aaPredicted RBP16.27■□□□□ 0.2
SLX4-202ENST00000466154 GPR17Q13304 367 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 PLD1Q13393 1074 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 KRT80Q6KB66 452 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 NUDT8Q8WV74 236 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 EEF1AKMT1Q8WVE0 214 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 DLG3Q92796 817 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 BTBD9Q96Q07 612 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 TUBB1Q9H4B7 451 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 POLG2Q9UHN1 485 aa16.27■□□□□ 0.2
SLX4-202ENST00000466154 PRSS51A0A1B0GVH4 220 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 PDLIM1O00151 329 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 INSIG1O15503 277 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 VNN2O95498 520 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 NCK1P16333 377 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 C18orf21Q32NC0 220 aaPredicted RBP16.27■□□□□ 0.19
SLX4-202ENST00000466154 SAMD4BQ5PRF9 694 aaKnown RBP16.27■□□□□ 0.19
SLX4-202ENST00000466154 ATXN7L2Q5T6C5 722 aaPredicted RBP16.27■□□□□ 0.19
SLX4-202ENST00000466154 FBXO22Q8NEZ5 403 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 LINGO1Q96FE5 620 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 TTPALQ9BTX7 342 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 HGH1Q9BTY7 390 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 FAM192AQ9GZU8 254 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 MARCH5Q9NX47 278 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 TMEM161AQ9NX61 479 aa16.27■□□□□ 0.19
SLX4-202ENST00000466154 EIF2B4Q9UI10 523 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms