RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SLC25A51Q9H1U9 297 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 MTG2Q9H4K7 406 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 NOL6Q9H6R4 1146 aaKnown RBP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 KCNK9Q9NPC2 374 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 RBM22Q9NW64 420 aaKnown RBP eCLIP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 ELOVL2Q9NXB9 296 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 MOCS1Q9NZB8 636 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 SERGEFQ9UGK8 458 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 ZNF510Q9Y2H8 683 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 FLNCQ14315 2725 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 FAM237BA0A1B0GVD1 139 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 A0A1B0GVM2 712 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 TCAF2A6NFQ2 919 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 USP1O94782 785 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 ZWINTO95229 277 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 MT-ND3P03897 115 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 SNRPAP09012 282 aaKnown RBP13.86□□□□□ -0.19
HDAC6-215ENST00000465457 C6P13671 934 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 GLDCP23378 1020 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 MGAT1P26572 445 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 CORO1AP31146 461 aaKnown RBP13.86□□□□□ -0.19
HDAC6-215ENST00000465457 SESN2P58004 480 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-215ENST00000465457 INSM1Q01101 510 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-215ENST00000465457 SERINC3Q13530 473 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 RFTN1Q14699 578 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-215ENST00000465457 CRYMQ14894 314 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 SLC14A2Q15849 920 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 ALFQ53S48 1182 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 FAM133BQ5BKY9 247 aaKnown RBP13.86□□□□□ -0.19
HDAC6-215ENST00000465457 NADSYN1Q6IA69 706 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 TFAP2DQ7Z6R9 452 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 SPATS2Q86XZ4 545 aaKnown RBP13.86□□□□□ -0.19
HDAC6-215ENST00000465457 CTAGE3PQ8IX95 158 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 CYP4X1Q8N118 509 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 BCAS4Q8TDM0 211 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 HMCESQ96FZ2 354 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 CHMP6Q96FZ7 201 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 TBL1YQ9BQ87 522 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 GORASP1Q9BQQ3 440 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 FSD1LQ9BXM9 530 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 BTBD1Q9H0C5 482 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 NSMCE4AQ9NXX6 385 aa13.86□□□□□ -0.19
HDAC6-215ENST00000465457 ILVBLA1L0T0 632 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 NDUFAB1O14561 156 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 VILLO15195 856 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 TM9SF1O15321 606 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 PRAMEF11O60813 436 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 CNTN5O94779 1100 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 C1QAP02745 245 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 HLA-DQB2P05538 268 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 EPHA8P29322 1005 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-215ENST00000465457 GRIA1P42261 906 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 C21orf59P57076 290 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 TMPRSS3P57727 454 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 RPS14P62263 151 aaKnown RBP13.85□□□□□ -0.19
HDAC6-215ENST00000465457 RHDQ02161 417 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 MGAT5Q09328 741 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 ILF2Q12905 390 aaKnown RBP13.85□□□□□ -0.19
HDAC6-215ENST00000465457 BNIP3Q12983 259 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 MTM1Q13496 603 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 LAMB3Q13751 1172 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 ZSCAN26Q16670 478 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 KIAA1614Q5VZ46 1190 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 ARHGAP36Q6ZRI8 547 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 TMEM135Q86UB9 458 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 PPM1NQ8N819 430 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 OR52K1Q8NGK4 314 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 GABPB2Q8TAK5 448 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-215ENST00000465457 UCMAQ8WVF2 138 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 IMP4Q96G21 291 aaKnown RBP13.85□□□□□ -0.19
HDAC6-215ENST00000465457 HIC2Q96JB3 615 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 ACE2Q9BYF1 805 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-215ENST00000465457 TMEM245Q9H330 911 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 CAAP1Q9H8G2 361 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 MRM3Q9HC36 420 aaKnown RBP13.85□□□□□ -0.19
HDAC6-215ENST00000465457 NDFIP2Q9NV92 336 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 SYBUQ9NX95 663 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 MKS1Q9NXB0 559 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 CLCA2Q9UQC9 943 aa13.85□□□□□ -0.19
HDAC6-215ENST00000465457 TLN1Q9Y490 2541 aaKnown RBP13.84□□□□□ -0.19
HDAC6-215ENST00000465457 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-215ENST00000465457 CAPN8A6NHC0 703 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 NPC1O15118 1278 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 PEX11BO96011 259 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 MPOP05164 745 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 CES1P23141 567 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 GNA12Q03113 381 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 ZNF177Q13360 481 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-215ENST00000465457 SPARCL1Q14515 664 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 EFTUD2Q15029 972 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■■■□ 21.2
HDAC6-215ENST00000465457 KIAA0895LQ68EN5 471 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 TTC19Q6DKK2 380 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-215ENST00000465457 KANSL1Q7Z3B3 1105 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 PRICKLE2Q7Z3G6 844 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 ZNF354CQ86Y25 554 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 DENND1CQ8IV53 801 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 MPP5Q8N3R9 675 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 DCBLD1Q8N8Z6 715 aa13.84□□□□□ -0.19
HDAC6-215ENST00000465457 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.84□□□□□ -0.19
HDAC6-215ENST00000465457 HJURPQ8NCD3 748 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms