RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 MCCC1Q96RQ3 725 aaPredicted RBP17.43■□□□□ 0.38
CPSF4-209ENST00000465132 MYOCQ99972 504 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 ERP44Q9BS26 406 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 FICDQ9BVA6 458 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 CARD6Q9BX69 1037 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 FAM129AQ9BZQ8 928 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 XAB2Q9HCS7 855 aaKnown RBP17.43■□□□□ 0.38
CPSF4-209ENST00000465132 NEU2Q9Y3R4 380 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 CAPN8A6NHC0 703 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 RIOK3O14730 519 aaKnown RBP17.42■□□□□ 0.38
CPSF4-209ENST00000465132 PCDH8O95206 1070 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 CRTAMO95727 393 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 ZSCAN5DPP0CG00 497 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 MLNP12872 115 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 ETS1P14921 441 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 DGKAP23743 735 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 VIPR1P32241 457 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 MAGEA6P43360 314 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 VPS41P49754 854 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 ZNF284Q2VY69 593 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 TMEM52BQ4KMG9 183 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 KCTD11Q693B1 232 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 LRRC69Q6ZNQ3 347 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 DPPA4Q7L190 304 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 KDELC2Q7Z4H8 507 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 DCBLD1Q8N8Z6 715 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 TRIB3Q96RU7 358 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 UBL7Q96S82 380 aaPredicted RBP17.42■□□□□ 0.38
CPSF4-209ENST00000465132 LYSMD1Q96S90 227 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 CDH19Q9H159 772 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 PCDH12Q9NPG4 1184 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 CLCA2Q9UQC9 943 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 FADS3Q9Y5Q0 445 aa17.42■□□□□ 0.38
CPSF4-209ENST00000465132 ARID1BQ8NFD5 2236 aaPredicted RBP17.41■□□□□ 0.38
CPSF4-209ENST00000465132 C2orf81A6NN90 581 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 DNALI1O14645 258 aaPredicted RBP17.41■□□□□ 0.38
CPSF4-209ENST00000465132 AREL1O15033 823 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 RRP8O43159 456 aaKnown RBP17.41■□□□□ 0.38
CPSF4-209ENST00000465132 PPFIA2O75334 1257 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 ELFN1P0C7U0 828 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 ADRA1AP35348 466 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 NPY2RP49146 381 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 DRG2P55039 364 aaKnown RBP17.41■□□□□ 0.38
CPSF4-209ENST00000465132 E2F1Q01094 437 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 SGCGQ13326 291 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 MORF4L2Q15014 288 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 ZDHHC20Q5W0Z9 365 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 CEP128Q6ZU80 1094 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 NLRP9Q7RTR0 991 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 GLIS1Q8NBF1 620 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 MCUQ8NE86 351 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 OR4C6Q8NH72 309 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 SNIP1Q8TAD8 396 aaKnown RBP17.41■□□□□ 0.38
CPSF4-209ENST00000465132 C19orf43Q9BQ61 176 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 PRORYQ9H606 182 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 FZD3Q9NPG1 666 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 UCKL1Q9NWZ5 548 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.41■□□□□ 0.38
CPSF4-209ENST00000465132 BFARQ9NZS9 450 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 WHRNQ9P202 907 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 SHOC2Q9UQ13 582 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 ASXL3Q9C0F0 2248 aa17.41■□□□□ 0.38
CPSF4-209ENST00000465132 RGSL1A5PLK6 1076 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 F5H423 210 aaPredicted RBP17.4■□□□□ 0.38
CPSF4-209ENST00000465132 RAD51CO43502 376 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 BRINP1O60477 761 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 AGTP01019 485 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 PRLP01236 227 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 PDHA1P08559 390 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 HNRNPA2B1P22626 353 aaKnown RBP17.4■□□□□ 0.38
CPSF4-209ENST00000465132 AKT2P31751 481 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 MMP12P39900 470 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 DAB2P98082 770 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 GALNT3Q14435 633 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 QPCTQ16769 361 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 SIRPB2Q5JXA9 342 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 FAXCQ5TGI0 409 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 IZUMO3Q5VZ72 239 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 TAB3Q8N5C8 712 aaPredicted RBP17.4■□□□□ 0.38
CPSF4-209ENST00000465132 SLC25A41Q8N5S1 370 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 OR13H1Q8NG92 308 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 ASB12Q8WXK4 309 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 FGF11Q92914 225 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 GPR63Q9BZJ6 419 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 TSPYL1Q9H0U9 437 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 FAM114A2Q9NRY5 505 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 ANAPC5Q9UJX4 755 aa17.4■□□□□ 0.38
CPSF4-209ENST00000465132 ZFR2Q9UPR6 939 aaKnown RBP17.4■□□□□ 0.38
CPSF4-209ENST00000465132 MAGEB16A2A368 324 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 FFAR2O15552 330 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 PIAS2O75928 621 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 SLU7O95391 586 aaKnown RBP17.39■□□□□ 0.37
CPSF4-209ENST00000465132 MT-CO3P00414 261 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 PYGLP06737 847 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 GIMD1P0DJR0 217 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 CLDN2P57739 230 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 KCNJ11Q14654 390 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 SEL1L3Q68CR1 1132 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 LRRC8BQ6P9F7 803 aa17.39■□□□□ 0.37
CPSF4-209ENST00000465132 GCNT7Q6ZNI0 430 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms