RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ALG1LQ6GMV1 187 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 C11orf63Q6NUN7 778 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 BRAT1Q6PJG6 821 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 MFSD7Q6UXD7 560 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 NPNTQ6UXI9 565 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 LIPIQ6XZB0 460 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 USP53Q70EK8 1073 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 ZNF438Q7Z4V0 828 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 SRLQ86TD4 932 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 C17orf82Q86X59 251 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 CAMK1DQ8IU85 385 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 Q8N9G6 341 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 KCTD6Q8NC69 237 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 OR6C4Q8NGE1 309 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 OR56A4Q8NGH8 313 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 SCG3Q8WXD2 468 aaKnown RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 KRT35Q92764 455 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 FATE1Q969F0 183 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 HDAC11Q96DB2 347 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 ZNF641Q96N77 438 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 TSGA13Q96PP4 275 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 BAG1Q99933 345 aaPredicted RBP7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 DESI2Q9BSY9 194 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 LGR4Q9BXB1 951 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 SEMA6CQ9H3T2 930 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 SEPT3Q9UH03 358 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 IL17BQ9UHF5 180 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 ST14Q9Y5Y6 855 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 ALG6Q9Y672 507 aa7.92□□□□□ -1.14
CDC42BPA-210ENST00000462553 GRID2IPA4D2P6 1211 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 CFAP69A5D8W1 941 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 TNFRSF10CO14798 259 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 SUV39H1O43463 412 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 HTRA2O43464 458 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 SPOPO43791 374 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 NUDT21O43809 227 aaKnown RBP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 TNFP01375 233 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 FUCA1P04066 466 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 HOXC4P09017 264 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 XPAP23025 273 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 TRIM23P36406 574 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 CDKN2BP42772 138 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 NOP2P46087 812 aaKnown RBP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 MAZP56270 477 aaKnown RBP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 MAXP61244 160 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 SRSF1Q07955 248 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 ADCY2Q08462 1091 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 NSUN2Q08J23 767 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 TRAF2Q12933 501 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 ZNF235Q14590 738 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 GRM3Q14832 879 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 NR1D2Q14995 579 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 CLCA4Q14CN2 919 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 SPA17Q15506 151 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 MANEAQ5SRI9 462 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 FAM182AQ5T1J6 154 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 ERAP2Q6P179 960 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 SPOCD1Q6ZMY3 1216 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 ZNF574Q6ZN55 896 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 DPPA4Q7L190 304 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 NRROSQ86YC3 692 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 MAP7D3Q8IWC1 876 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 RHOT1Q8IXI2 618 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 LRRC57Q8N9N7 239 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 FAM46DQ8NEK8 389 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 ATL2Q8NHH9 583 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 USP7Q93009 1102 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 TMEM159Q96B96 161 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 OLFM3Q96PB7 478 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 NUDCD1Q96RS6 583 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 TUBGCP5Q96RT8 1024 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 SEMA3CQ99985 751 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 HERPUD2Q9BSE4 406 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 FAM117AQ9C073 453 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 ATP13A3Q9H7F0 1226 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 RDH14Q9HBH5 336 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 NOD2Q9HC29 1040 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 NT5MQ9NPB1 228 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 DDX56Q9NY93 547 aaKnown RBP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 LRIT1Q9P2V4 623 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 TRIM10Q9UDY6 481 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 HEMK1Q9Y5R4 338 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 MYO9AB2RTY4 2548 aa7.91□□□□□ -1.14
CDC42BPA-210ENST00000462553 LRBAP50851 2863 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 hCG_1818297A0A087WSY0 165 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 PRSS38A1L453 326 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 CACNB4O00305 520 aaPredicted RBP7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 APOL1O14791 398 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 B4GAT1O43505 415 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 SOCS5O75159 536 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 HLA-DQB2P05538 268 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 ELFN1P0C7U0 828 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 CCL4P13236 92 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 TNNT1P13805 278 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 PECAM1P16284 738 aaPredicted RBP7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 CCNCP24863 283 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 CD82P27701 267 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 SERPINA4P29622 427 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 CSF2RBP32927 897 aa7.9□□□□□ -1.14
CDC42BPA-210ENST00000462553 CTNNA1P35221 906 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms