RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SUCOQ9UBS9 1254 aaKnown RBP5.8□□□□□ -1.48
VPS36-202ENST00000462289 SERGEFQ9UGK8 458 aa5.8□□□□□ -1.48
VPS36-202ENST00000462289 SLC25A13Q9UJS0 675 aa5.8□□□□□ -1.48
VPS36-202ENST00000462289 TTC7AQ9ULT0 858 aaPredicted RBP5.8□□□□□ -1.48
VPS36-202ENST00000462289 ATP8A1Q9Y2Q0 1164 aa5.8□□□□□ -1.48
VPS36-202ENST00000462289 HYOU1Q9Y4L1 999 aa5.8□□□□□ -1.48
VPS36-202ENST00000462289 PCDHGA5Q9Y5G8 931 aa5.8□□□□□ -1.48
VPS36-202ENST00000462289 BPTFQ12830 3046 aa5.8□□□□□ -1.48
VPS36-202ENST00000462289 GOLGA4Q13439 2230 aaKnown RBP5.8□□□□□ -1.48
VPS36-202ENST00000462289 ADAMTS9Q9P2N4 1935 aa5.8□□□□□ -1.48
VPS36-202ENST00000462289 PLXNB3Q9ULL4 1909 aa5.8□□□□□ -1.48
VPS36-202ENST00000462289 ARHGEF17Q96PE2 2063 aaPredicted RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 COL5A1P20908 1838 aaPredicted RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 MACROD2A1Z1Q3 448 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 CFAP69A5D8W1 941 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 PRR23AA6NEV1 266 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 HACD1B0YJ81 288 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 CES2O00748 559 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 PLRG1O43660 514 aaKnown RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 SPOPO43791 374 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 SOCS5O75159 536 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 RPP40O75818 363 aaKnown RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 EPN2O95208 641 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 POP4O95707 220 aaKnown RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 PRLP01236 227 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 IGHV4-34P06331 123 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 GSNP06396 782 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 MMP2P08253 660 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 PECAM1P16284 738 aaPredicted RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 PRKCAP17252 672 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 BCKDHBP21953 392 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 OXTRP30559 389 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 CHRNA3P32297 505 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 NNMTP40261 264 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 WASP42768 502 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 NOP2P46087 812 aaKnown RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 CCR5P51681 352 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 SUOXP51687 545 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 AFF3P51826 1226 aaKnown RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 CCNHP51946 323 aaPredicted RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 METAP1P53582 386 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 ADPRHP54922 357 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 RWDD2BP57060 319 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 ST8SIA6P61647 398 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 AP1S1P61966 158 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 WASHC5Q12768 1159 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 BYSLQ13895 437 aaKnown RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 TFDP2Q14188 446 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 GRM3Q14832 879 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 MYLK3Q32MK0 819 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 IL31Q6EBC2 164 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 TIGD7Q6NT04 549 aaPredicted RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 NEK5Q6P3R8 708 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 NCEH1Q6PIU2 408 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 CRTC3Q6UUV7 619 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 SLC36A4Q6YBV0 504 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 PEX26Q7Z412 305 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 ZSCAN30Q86W11 494 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 TRIM69Q86WT6 500 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 FAM129CQ86XR2 697 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 SLC41A1Q8IVJ1 513 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 IGDCC3Q8IVU1 814 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 RAVER1Q8IY67 606 aaKnown RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 RASGEF1CQ8N431 466 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 FRMD1Q8N878 549 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 ATP11CQ8NB49 1132 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 HMGB4Q8WW32 186 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 ASB12Q8WXK4 309 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 OR8D1Q8WZ84 308 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 NKD2Q969F2 451 aaPredicted RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 ARRDC3Q96B67 414 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 SIPA1Q96FS4 1042 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 CELF6Q96J87 481 aaKnown RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 GDAP1L1Q96MZ0 367 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 ZNF641Q96N77 438 aaPredicted RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 QKIQ96PU8 341 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS36-202ENST00000462289 MCCC1Q96RQ3 725 aaPredicted RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 NUDCD1Q96RS6 583 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 TRIB3Q96RU7 358 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 LYSMD1Q96S90 227 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 HEPHQ9BQS7 1158 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 CALN1Q9BXU9 219 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 OSBPL8Q9BZF1 889 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 USP29Q9HBJ7 922 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 SGK2Q9HBY8 427 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 AP5S1Q9NUS5 200 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 KLHL11Q9NVR0 708 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 UBA2Q9UBT2 640 aaPredicted RBP5.79□□□□□ -1.48
VPS36-202ENST00000462289 AMFRQ9UKV5 643 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 HPCAL4Q9UM19 191 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS36-202ENST00000462289 PIKFYVEQ9Y2I7 2098 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 SPEGQ15772 3267 aa5.79□□□□□ -1.48
VPS36-202ENST00000462289 BCLAF3A2AJT9 711 aaKnown RBP5.78□□□□□ -1.48
VPS36-202ENST00000462289 USP27XA6NNY8 438 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 TMEM110-MUSTN1A8MSY1 372 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 APOL1O14791 398 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 MID1O15344 667 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 MTSS1O43312 755 aa5.78□□□□□ -1.48
VPS36-202ENST00000462289 SYNCRIPO60506 623 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms