RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578	KLK7	P49862	253 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	RENBP	P51606	427 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	AIF1	P55008	147 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	GSC	P56915	257 aa	Predicted RBP	13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	IL10RB	Q08334	325 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	SLC10A7	Q0GE19	358 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	MAP7	Q14244	749 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	ZNF235	Q14590	738 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	RFTN1	Q14699	578 aa	Predicted RBP	13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	LBR	Q14739	615 aa	Known RBP	13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	TRIM72	Q6ZMU5	477 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	CHST15	Q7LFX5	561 aa	Predicted RBP	13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	TP53INP2	Q8IXH6	220 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	NPW	Q8N729	165 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	SCARF2	Q96GP6	870 aa	Predicted RBP	13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	ELMO2	Q96JJ3	720 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	TBC1D10A	Q9BXI6	508 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	TWSG1	Q9GZX9	223 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	GAN	Q9H2C0	597 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	DHX35	Q9H5Z1	703 aa	Known RBP	13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	STN1	Q9H668	368 aa	Known RBP	13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	NLRC4	Q9NPP4	1024 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	ZNHIT2	Q9UHR6	403 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	KCNK6	Q9Y257	313 aa		13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13.65	□□□□□ -0.22
PABPC4-208	ENST00000461578	TEP1	Q99973	2627 aa	Known RBP	13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	PIPSL	A2A3N6	862 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	SNX2	O60749	519 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	KIAA0754	O94854	1291 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	ERCC2	P18074	760 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	TEAD1	P28347	426 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	HTR7	P34969	479 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	SOX5	P35711	763 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	PMS2	P54278	862 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	GFER	P55789	205 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	POLR2F	P61218	127 aa	Known RBP	13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	TRAF2	Q12933	501 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	CLEC16A	Q2KHT3	1053 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	TMCO4	Q5TGY1	634 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	TECPR1	Q7Z6L1	1165 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	PHF13	Q86YI8	300 aa	Predicted RBP	13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	RASGRP3	Q8IV61	690 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	CBARP	Q8N350	705 aa	Predicted RBP	13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	LZTR1	Q8N653	840 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	SCAMP4	Q969E2	229 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	AP2M1	Q96CW1	435 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	STAMBPL1	Q96FJ0	436 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	SMIM14	Q96QK8	99 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	PSKH2	Q96QS6	385 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	KCTD15	Q96SI1	283 aa	Predicted RBP	13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	AGAP2	Q99490	1192 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	CNPY3	Q9BT09	278 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	TRIM55	Q9BYV6	548 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	ABCG8	Q9H221	673 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	NOD2	Q9HC29	1040 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	SARS2	Q9NP81	518 aa	Known RBP	13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	CASS4	Q9NQ75	786 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	SIDT1	Q9NXL6	827 aa	Known RBP	13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	CNOT8	Q9UFF9	292 aa	Known RBP	13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	TBC1D29	Q9UFV1	150 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	PHTF1	Q9UMS5	762 aa		13.64	□□□□□ -0.23
PABPC4-208	ENST00000461578	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	TCRBV5S1A1T	A0A578	114 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	PSMD11	O00231	422 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	SOCS5	O75159	536 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	ATP1A1	P05023	1023 aa	Known RBP	13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	NFKBIA	P25963	317 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	SEPHS1	P49903	392 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	MAX	P61244	160 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	SH3BP2	P78314	561 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	OGDH	Q02218	1023 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	DPT	Q07507	201 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	LRP8	Q14114	963 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	NADK2	Q4G0N4	442 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	DCUN1D2	Q6PH85	259 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	ADAMTSL4	Q6UY14	1074 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	RFX8	Q6ZV50	586 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	MON1B	Q7L1V2	547 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	SLC9B2	Q86UD5	537 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	PGBD5	Q8N414	524 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	MLKL	Q8NB16	471 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	SH3KBP1	Q96B97	665 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	OR6C1	Q96RD1	312 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	TAB2	Q9NYJ8	693 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	PCSK1N	Q9UHG2	260 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	LNPEP	Q9UIQ6	1025 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	ESPL1	Q14674	2120 aa		13.63	□□□□□ -0.23
PABPC4-208	ENST00000461578	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	ITPR2	Q14571	2701 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578		A0A1W2PQ67	120 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	EPHB6	O15197	1021 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	CREG1	O75629	220 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	NDUFA10	O95299	355 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	ACP5	P13686	325 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	DES	P17661	470 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	CASP14	P31944	242 aa		13.62	□□□□□ -0.23

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