RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 VPREB1P12018 145 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 NAGAP17050 411 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 TBXAS1P24557 533 aaPredicted RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 STX2P32856 288 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 ARSEP51690 589 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 GPR143P51810 404 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 TERF1P54274 439 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 RAD23BP54727 409 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 ECT2LQ008S8 904 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 FOXM1Q08050 763 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 GRIK2Q13002 908 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 MAD2L1Q13257 205 aaPredicted RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 LAMB3Q13751 1172 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 BAATQ14032 418 aaPredicted RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 RABEP1Q15276 862 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 KYNUQ16719 465 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 ZNF284Q2VY69 593 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 SOWAHCQ53LP3 525 aaPredicted RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 ZNF805Q5CZA5 627 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 TCP11X2Q5H9J9 407 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 DNTTIP2Q5QJE6 756 aaKnown RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 RARS2Q5T160 578 aaKnown RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 ASPHD1Q5U4P2 390 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 MORN5Q5VZ52 161 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 KRT79Q5XKE5 535 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 TMEM198Q66K66 360 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 ZNF626Q68DY1 528 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 PLEKHA7Q6IQ23 1121 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 KCTD18Q6PI47 426 aaPredicted RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 SLC36A4Q6YBV0 504 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 B3GNT6Q6ZMB0 384 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 MTSS1LQ765P7 747 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 TAOK1Q7L7X3 1001 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 MRPL10Q7Z7H8 261 aaKnown RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 AACSQ86V21 672 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 PRIMA1Q86XR5 153 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 MCEMP1Q8IX19 187 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 DNAJC10Q8IXB1 793 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 ZBTB8BQ8NAP8 495 aaPredicted RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 OR6J1Q8NGC5 347 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 HM13Q8TCT9 377 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 INPP5DQ92835 1189 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 SECISBP2LQ93073 1101 aaKnown RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 LRRC59Q96AG4 307 aaKnown RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 VPS33AQ96AX1 596 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 COQ8BQ96D53 544 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 RMDN1Q96DB5 314 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 PGAP3Q96FM1 320 aaPredicted RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 CEP295NLQ96MC4 621 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 FIZ1Q96SL8 496 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 SH3GL2Q99962 352 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 RTN4RQ9BZR6 473 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 CLK4Q9HAZ1 481 aaKnown RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 CNGB3Q9NQW8 809 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 ACSS1Q9NUB1 689 aaPredicted RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 IL36RNQ9UBH0 155 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 UBA2Q9UBT2 640 aaPredicted RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 AMACRQ9UHK6 382 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 DBNLQ9UJU6 430 aaKnown RBP3.19□□□□□ -1.9
VCL-203ENST00000461383 ANAPC5Q9UJX4 755 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 PLAGL1Q9UM63 463 aa3.19□□□□□ -1.9
VCL-203ENST00000461383 A0A1B0GVM2 712 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 TRBC2A0A5B9 178 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 H0YIN7 160 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 M0QZ24 198 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 MASP2O00187 686 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 MAP2K7O14733 419 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 HS3ST1O14792 307 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 TIMM23O14925 209 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 PAPSS1O43252 624 aaPredicted RBP3.18□□□□□ -1.9
VCL-203ENST00000461383 DIAPH2O60879 1101 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 RSL1D1O76021 490 aaKnown RBP3.18□□□□□ -1.9
VCL-203ENST00000461383 ZWINTO95229 277 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 KCNK5O95279 499 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 VNN2O95498 520 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 FTCDO95954 541 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 BCL10O95999 233 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 GH2P01242 217 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 TRIM21P19474 475 aaKnown RBP3.18□□□□□ -1.9
VCL-203ENST00000461383 MAOAP21397 527 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 GNLYP22749 145 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 CPT2P23786 658 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 ACADLP28330 430 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 SUOXP51687 545 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 CSNK2A1P68400 391 aaPredicted RBP3.18□□□□□ -1.9
VCL-203ENST00000461383 ADORA2A-AS1P86434 159 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 SREBF2Q12772 1141 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 GRAPQ13588 217 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 CTTNQ14247 550 aaKnown RBP3.18□□□□□ -1.9
VCL-203ENST00000461383 DLG2Q15700 870 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 LETM2Q2VYF4 491 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 FNBP1LQ5T0N5 605 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 DCST1Q5T197 706 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 ANKRD54Q6NXT1 300 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 COLCA1Q6ZS62 124 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 Q6ZSV7 163 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 FAM47EQ6ZV65 393 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 ANKRD23Q86SG2 305 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 TSPAN33Q86UF1 283 aa3.18□□□□□ -1.9
VCL-203ENST00000461383 PIM3Q86V86 326 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms