RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 SLC22A18Q96BI1 424 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 MARK4Q96L34 752 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 APOLD1Q96LR9 279 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 POLDIP3Q9BY77 421 aaKnown RBP3.84□□□□□ -1.79
CLK1-206ENST00000461326 NDST4Q9H3R1 872 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 RABEP2Q9H5N1 569 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 ESRP2Q9H6T0 727 aaKnown RBP3.84□□□□□ -1.79
CLK1-206ENST00000461326 PPP1R3EQ9H7J1 279 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 PLAC1Q9HBJ0 212 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 ZBTB40Q9NUA8 1239 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 RCOR1Q9UKL0 485 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 TTC7AQ9ULT0 858 aaPredicted RBP3.84□□□□□ -1.79
CLK1-206ENST00000461326 PPIEQ9UNP9 301 aaKnown RBP3.84□□□□□ -1.79
CLK1-206ENST00000461326 FAM169AQ9Y6X4 670 aa3.84□□□□□ -1.79
CLK1-206ENST00000461326 SMAD9O15198 467 aaKnown RBP3.83□□□□□ -1.8
CLK1-206ENST00000461326 SPRY3O43610 288 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 AVILO75366 819 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 VNN2O95498 520 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 TPOP07202 933 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 ANXA7P20073 488 aaKnown RBP3.83□□□□□ -1.8
CLK1-206ENST00000461326 SCP2P22307 547 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 EEF1DP29692 281 aaKnown RBP3.83□□□□□ -1.8
CLK1-206ENST00000461326 HNRNPH1P31943 449 aaKnown RBP3.83□□□□□ -1.8
CLK1-206ENST00000461326 RFX2P48378 723 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 ARSEP51690 589 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 CLCN3P51790 818 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 GPR143P51810 404 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 POU5F1Q01860 360 aaKnown RBP3.83□□□□□ -1.8
CLK1-206ENST00000461326 SREBF2Q12772 1141 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 GRIK2Q13002 908 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 KCNC3Q14003 757 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 C2orf68Q2NKX9 166 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 PRTGQ2VWP7 1150 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 MMEL1Q495T6 779 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 TCP11X2Q5H9J9 407 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 FSCBQ5H9T9 825 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 EFHC1Q5JVL4 640 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 KCTD18Q6PI47 426 aaPredicted RBP3.83□□□□□ -1.8
CLK1-206ENST00000461326 HAPLN4Q86UW8 402 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 PIM3Q86V86 326 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 SCML4Q8N228 414 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 MINDY1Q8N5J2 469 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 IL17RCQ8NAC3 791 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 CCDC191Q8NCU4 936 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 APPL2Q8NEU8 664 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 GPT2Q8TD30 523 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 MAGEC3Q8TD91 643 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 ADAMTS14Q8WXS8 1223 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 SLC25A28Q96A46 364 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 CEP295NLQ96MC4 621 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 DACH2Q96NX9 599 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 CENPOQ9BU64 300 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 APOL6Q9BWW8 343 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 AP1M1Q9BXS5 423 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 TMEM39BQ9GZU3 492 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 C17orf75Q9HAS0 396 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 EPB41L5Q9HCM4 733 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 ARHGEF38Q9NXL2 777 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 TAB2Q9NYJ8 693 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 WSB2Q9NYS7 404 aaPredicted RBP3.83□□□□□ -1.8
CLK1-206ENST00000461326 ACSL5Q9ULC5 683 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 FZD10Q9ULW2 581 aa3.83□□□□□ -1.8
CLK1-206ENST00000461326 R3HDM2Q9Y2K5 976 aaKnown RBP3.83□□□□□ -1.8
CLK1-206ENST00000461326 IGHV4-28A0A0C4DH34 117 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 A0A1B0GVM2 712 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 RPS10-NUDT3A0A1W2PQS6 291 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 LNP1A1A4G5 178 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 GOLGA6L9A6NEM1 432 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 A8MV72 311 aaPredicted RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 H0YGN5 161 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 ATP2A1O14983 1001 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 PAPSS1O43252 624 aaPredicted RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 ADAM20O43506 726 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 GAGE7O76087 117 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 SELLP14151 372 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 TNFRSF1BP20333 461 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 RPL3P39023 403 aaKnown RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 THPOP40225 353 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 LIG4P49917 911 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 NUDT6P53370 316 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 CSNK2A1P68400 391 aaPredicted RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 CXCL9Q07325 125 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 GAGE1Q13065 139 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 GAGE4Q13068 117 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 MAD2L1Q13257 205 aaPredicted RBP3.82□□□□□ -1.8
CLK1-206ENST00000461326 TNFAIP1Q13829 316 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 KRTAP27-1Q3LI81 207 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 ZNF805Q5CZA5 627 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 BMP2KLQ5H9B9 411 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 C9orf152Q5JTZ5 239 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 SPECC1Q5M775 1068 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 DAB2IPQ5VWQ8 1189 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 NUGGCQ68CJ6 796 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 ANKRD54Q6NXT1 300 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 Q6ZSV7 163 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 Q6ZTK2 550 aa3.82□□□□□ -1.8
CLK1-206ENST00000461326 TAOK1Q7L7X3 1001 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms