RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-229	ENST00000460826	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.93	□□□□□ -0.18
HDLBP-229	ENST00000460826		A0A1B0GTQ1	180 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	C2orf81	A6NN90	581 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	CCL22	O00626	93 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	DNALI1	O14645	258 aa	Predicted RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	INPP4B	O15327	924 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	GPR39	O43194	453 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	RAD51C	O43502	376 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	FOXD2	O60548	495 aa	Predicted RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	CER1	O95813	267 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	ADCY8	P40145	1251 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	SESN2	P58004	480 aa	Predicted RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	TMPRSS15	P98073	1019 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	CDK3	Q00526	305 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	CKAP4	Q07065	602 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	BNIP3	Q12983	259 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	DHX34	Q14147	1143 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	WHAMMP3	Q1A5X7	153 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	IL27RA	Q6UWB1	636 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	TRAM1L1	Q8N609	369 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	NAT8L	Q8N9F0	302 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	KIF18A	Q8NI77	898 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	PTCD2	Q8WV60	388 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	DNAJC1	Q96KC8	554 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	PLEKHG4B	Q96PX9	1271 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	SPATA16	Q9BXB7	569 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	ERVMER34-1	Q9H9K5	563 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	IL26	Q9NPH9	171 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	RAD18	Q9NS91	495 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	DNAAF2	Q9NVR5	837 aa	Known RBP	13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	TMPRSS11E	Q9UL52	423 aa		13.92	□□□□□ -0.18
HDLBP-229	ENST00000460826	PIKFYVE	Q9Y2I7	2098 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	GOLGA8M	H3BSY2	632 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	CACNB4	O00305	520 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	SCAMP1	O15126	338 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	AVIL	O75366	819 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	CRTAM	O95727	393 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	HOXC4	P09017	264 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	MYCLP1	P12525	358 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	MGAT1	P26572	445 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	HOXD11	P31277	338 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	SPAM1	P38567	509 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	RXRG	P48443	463 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	CRADD	P78560	199 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	XIAP	P98170	497 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	CDK16	Q00536	496 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	PTK2B	Q14289	1009 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	CHRNA6	Q15825	494 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	UAP1L1	Q3KQV9	507 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	IZUMO3	Q5VZ72	239 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	LRRC8B	Q6P9F7	803 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	ENPP7	Q6UWV6	458 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	FAM151B	Q6UXP7	276 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	CAND1	Q86VP6	1230 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	PARG	Q86W56	976 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	RBFA	Q8N0V3	343 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	OR1E3	Q8WZA6	343 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	TSACC	Q96A04	125 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	PDXP	Q96GD0	296 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	COX14	Q96I36	57 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	WDR92	Q96MX6	357 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	TRIM31	Q9BZY9	425 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	CDH19	Q9H159	772 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	FGF22	Q9HCT0	170 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	ARFGAP3	Q9NP61	516 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	MRPL40	Q9NQ50	206 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	DNAJC28	Q9NX36	388 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	TMEM98	Q9Y2Y6	226 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	PKP3	Q9Y446	797 aa		13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	OAS3	Q9Y6K5	1087 aa	Known RBP	13.91	□□□□□ -0.18
HDLBP-229	ENST00000460826	GLYATL1P3	A0A0U1RQE8	302 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	MROH6	A6NGR9	719 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	UGT1A9	O60656	530 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	SDC3	O75056	442 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	FUCA1	P04066	466 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	CSF2	P04141	144 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	CEACAM5	P06731	702 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	NME1	P15531	152 aa	Known RBP	13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	UGT1A6	P19224	532 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	UGT1A1	P22309	533 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	UGT1A4	P22310	534 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	EPHA8	P29322	1005 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	UGT1A3	P35503	534 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	UGT1A5	P35504	534 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	POLD2	P49005	469 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	CCT8	P50990	548 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	ARSD	P51689	593 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	PEX6	Q13608	980 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	ALG11	Q2TAA5	492 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	ATP13A5	Q4VNC0	1218 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	ZNF648	Q5T619	568 aa	Predicted RBP	13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	DOK6	Q6PKX4	331 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	GATAD2A	Q86YP4	633 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	PPIL6	Q8IXY8	311 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	MCU	Q8NE86	351 aa		13.9	□□□□□ -0.18
HDLBP-229	ENST00000460826	HIC2	Q96JB3	615 aa		13.9	□□□□□ -0.18

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