RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 SPATA16Q9BXB7 569 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 TEX101Q9BY14 249 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 FRMD8Q9BZ67 464 aaPredicted RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 FAM83DQ9H4H8 585 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 PHPT1Q9NRX4 125 aaPredicted RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 DNAJC28Q9NX36 388 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 KCTD5Q9NXV2 234 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 KLF15Q9UIH9 416 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 CDC23Q9UJX2 597 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 PKP3Q9Y446 797 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 OAS3Q9Y6K5 1087 aaKnown RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 TOR1BO14657 336 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 SCAMP1O15126 338 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 RAD51CO43502 376 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 PRAMEF1O95521 474 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 CRTAMO95727 393 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 LPOP22079 712 aaPredicted RBP12.75□□□□□ -0.37
COL18A1-206ENST00000459895 CA5AP35218 305 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 TRIM23P36406 574 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 SESN2P58004 480 aaPredicted RBP12.75□□□□□ -0.37
COL18A1-206ENST00000459895 CRADDP78560 199 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 TMPRSS15P98073 1019 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 DHX34Q14147 1143 aaKnown RBP12.75□□□□□ -0.37
COL18A1-206ENST00000459895 TCEA2Q15560 299 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 WHAMMP3Q1A5X7 153 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 UAP1L1Q3KQV9 507 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 RNASEH2BQ5TBB1 312 aaKnown RBP12.75□□□□□ -0.37
COL18A1-206ENST00000459895 RIF1Q5UIP0 2472 aaKnown RBP12.75□□□□□ -0.37
COL18A1-206ENST00000459895 IZUMO3Q5VZ72 239 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 KANSL1Q7Z3B3 1105 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 GATAD2AQ86YP4 633 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 PHACTR4Q8IZ21 702 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 OXR1Q8N573 874 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 TRAM1L1Q8N609 369 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 NAT8LQ8N9F0 302 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 ZNF548Q8NEK5 533 aaPredicted RBP12.75□□□□□ -0.37
COL18A1-206ENST00000459895 OR4K2Q8NGD2 314 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 BRSK1Q8TDC3 778 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 COX14Q96I36 57 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 DCHS1Q96JQ0 3298 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 ZSCAN5AQ9BUG6 496 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 LRRC61Q9BV99 259 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 ERVMER34-1Q9H9K5 563 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 ARFGAP3Q9NP61 516 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 MRPL40Q9NQ50 206 aaKnown RBP12.75□□□□□ -0.37
COL18A1-206ENST00000459895 RAD18Q9NS91 495 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 TM7SF3Q9NS93 570 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 SYBUQ9NX95 663 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 KLQ9UEF7 1012 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 APOBEC3BQ9UH17 382 aaKnown RBP12.75□□□□□ -0.37
COL18A1-206ENST00000459895 TMPRSS11EQ9UL52 423 aa12.75□□□□□ -0.37
COL18A1-206ENST00000459895 ZFC3H1O60293 1989 aaKnown RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 GLYATL1P3A0A0U1RQE8 302 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 PRSS38A1L453 326 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 C2orf81A6NN90 581 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 GOLGA8MH3BSY2 632 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 DNALI1O14645 258 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 STX7O15400 261 aaKnown RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 PYGLP06737 847 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 CELA2BP08218 269 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 ZNF883P0CG24 379 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 MGAT1P26572 445 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 HTR1BP28222 390 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 ARRB1P49407 418 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 PTK2BQ14289 1009 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 ATP13A5Q4VNC0 1218 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 KHDC1Q4VXA5 237 aaKnown RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 SYDE1Q6ZW31 735 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 DCP2Q8IU60 420 aaKnown RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 PHYKPLQ8IUZ5 450 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 MPP5Q8N3R9 675 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 PPHLN1Q8NEY8 458 aaKnown RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 OR56A4Q8NGH8 313 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 SERPINB12Q96P63 405 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 RANBP9Q96S59 729 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 CDH19Q9H159 772 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 SUDS3Q9H7L9 328 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 IL26Q9NPH9 171 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 UCKL1Q9NWZ5 548 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 CNOT6Q9ULM6 557 aaKnown RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 BTBD3Q9Y2F9 522 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 TCAF1Q9Y4C2 921 aa12.74□□□□□ -0.37
COL18A1-206ENST00000459895 PCYT1BQ9Y5K3 369 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-206ENST00000459895 HEATR9A2RTY3 570 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 MROH6A6NGR9 719 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 H3BM21 787 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 YKT6O15498 198 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 AVILO75366 819 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 PIAS2O75928 621 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 CSF2P04141 144 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 HOXC4P09017 264 aaPredicted RBP12.73□□□□□ -0.37
COL18A1-206ENST00000459895 CD59P13987 128 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 JUNDP17535 347 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 IVDP26440 423 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 POLD2P49005 469 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 ARSDP51689 593 aa12.73□□□□□ -0.37
COL18A1-206ENST00000459895 SRP54P61011 504 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms