RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	CCDC137	Q6PK04	289 aa	Known RBP	10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	ENPP7	Q6UWV6	458 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	GLT6D1	Q7Z4J2	308 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	HID1	Q8IV36	788 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	SFTPA2	Q8IWL1	248 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	RAVER1	Q8IY67	606 aa	Known RBP	10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	OXR1	Q8N573	874 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	OR56A4	Q8NGH8	313 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	ATL2	Q8NHH9	583 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	CCL4L1	Q8NHW4	92 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	CCDC97	Q96F63	343 aa	Predicted RBP	10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	C16orf45	Q96MC5	204 aa	Predicted RBP	10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	TRABD	Q9H4I3	376 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	CASS4	Q9NQ75	786 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	HOMER3	Q9NSC5	361 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	GOLGA6A	Q9NYA3	693 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	HACD3	Q9P035	362 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	FKBPL	Q9UIM3	349 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	SLC17A4	Q9Y2C5	497 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	CABIN1	Q9Y6J0	2220 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	LY6G6E	A0A0G2JKS1	128 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	SPAAR	A0A1B0GVQ0	90 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	PRSS38	A1L453	326 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	RGSL1	A5PLK6	1076 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	ERI2	A8K979	691 aa	Known RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	CACNB4	O00305	520 aa	Predicted RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	FFAR2	O15552	330 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	FLRT2	O43155	660 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	DFNA5	O60443	496 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	UGT1A9	O60656	530 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	KCNK5	O95279	499 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	APRT	P07741	180 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	MYF5	P13349	255 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	UGT1A6	P19224	532 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	CSRP1	P21291	193 aa	Known RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	UGT1A1	P22309	533 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	UGT1A4	P22310	534 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	PSMA3	P25788	255 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	IVD	P26440	423 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	UGT1A3	P35503	534 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	UGT1A5	P35504	534 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	MAGEA6	P43360	314 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	FNTA	P49354	379 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	ARSD	P51689	593 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	HK3	P52790	923 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	KCNJ11	Q14654	390 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	POU6F1	Q14863	301 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	CHRNA6	Q15825	494 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	ATP13A5	Q4VNC0	1218 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	CCDC38	Q502W7	563 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	PSAPL1	Q6NUJ1	521 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	DOK6	Q6PKX4	331 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	FAM151B	Q6UXP7	276 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	GSTA5	Q7RTV2	222 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	TRAM1L1	Q8N609	369 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	EID2	Q8N6I1	236 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	PNPLA1	Q8N8W4	532 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	OR4K2	Q8NGD2	314 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	CCHCR1	Q8TD31	782 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	BRSK1	Q8TDC3	778 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	CPT1B	Q92523	772 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	SCARF2	Q96GP6	870 aa	Predicted RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	HIC2	Q96JB3	615 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	DNAJC1	Q96KC8	554 aa	Known RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	ZNF778	Q96MU6	729 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	PPP1R2P1	Q96PQ5	205 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	NAP1L3	Q99457	506 aa	Predicted RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	TMEM168	Q9H0V1	697 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	UGT1A7	Q9HAW7	530 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	UGT1A10	Q9HAW8	530 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	UGT1A8	Q9HAW9	530 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	EIF2B3	Q9NR50	452 aa	Known RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	PHPT1	Q9NRX4	125 aa	Predicted RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	TOR4A	Q9NXH8	423 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	KCTD5	Q9NXV2	234 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	KL	Q9UEF7	1012 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	APOBEC3B	Q9UH17	382 aa	Known RBP	10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	PLEKHM1	Q9Y4G2	1056 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	DGKB	Q9Y6T7	804 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783		U3KQA8	63 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	CACNA1G	O43497	2377 aa		10.19	□□□□□ -0.78
MRPL55-223	ENST00000459783	CCDC78	A2IDD5	438 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	MROH6	A6NGR9	719 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	TNFRSF10C	O14798	259 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	YKT6	O15498	198 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	PSMD3	O43242	534 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	AQP9	O43315	295 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	SIGLEC6	O43699	453 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	DNAJC6	O75061	913 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	MTX2	O75431	263 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	RASGRP1	O95267	797 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	PRSS56	P0CW18	603 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	LPO	P22079	712 aa	Predicted RBP	10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	CASQ1	P31415	396 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	SPAM1	P38567	509 aa		10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	NOVA1	P51513	510 aa	Known RBP	10.18	□□□□□ -0.78
MRPL55-223	ENST00000459783	HNRNPK	P61978	463 aa	Known RBP eCLIP	10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms