RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ASPAP45381 313 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ATP5OP48047 213 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 MFSD13AQ14CX5 517 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 TKFCQ3LXA3 575 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ATG16L1Q676U5 607 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 DENND5AQ6IQ26 1287 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 BMP8AQ7Z5Y6 402 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ZC3HC1Q86WB0 502 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 C2orf69Q8N8R5 385 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 RP9Q8TA86 221 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 TRIM39Q9HCM9 518 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 HOMER2Q9NSB8 354 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ABCD2Q9UBJ2 740 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 MAN2B2Q9Y2E5 1009 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 MED16Q9Y2X0 877 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 PCDHB14Q9Y5E9 798 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 STYXL1Q9Y6J8 313 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 UBE4BO95155 1302 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 SCN5AQ14524 2016 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 M0R082 166 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 MCF2LO15068 1137 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 CAPN5O15484 640 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 PI15O43692 258 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 HUS1O60921 280 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 DIRAS1O95057 198 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 MFN2O95140 757 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 PIK3CBP42338 1070 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 PGFP49763 221 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ARSFP54793 590 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 RPL26P61254 145 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC35A2P78381 396 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 TIAL1Q01085 375 aaKnown RBP eCLIP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 SMU1Q2TAY7 513 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 IQCCQ4KMZ1 466 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 SETMARQ53H47 684 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 FAM102BQ5T8I3 360 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 GADL1Q6ZQY3 521 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 TSEN54Q7Z6J9 526 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF605Q86T29 641 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 DCP2Q8IU60 420 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 CPXCR1Q8N123 301 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 SDR16C5Q8N3Y7 309 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF557Q8N988 423 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 VMP1Q96GC9 406 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 MBOAT4Q96T53 435 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 OLFM1Q99784 485 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 FEM1AQ9BSK4 669 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 MLPHQ9BV36 600 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 DUSP21Q9H596 190 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 SPATA6Q9NWH7 488 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 GID8Q9NWU2 228 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 CACNG4Q9UBN1 327 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 FBXO5Q9UKT4 447 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 CNTNAP1P78357 1384 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 EML5Q05BV3 1969 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 RNF103-CHMP3A0A140T963 221 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 OR2W5A6NFC9 320 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 TCP10L2B9ZVM9 353 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 M0R129 80 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ACAT1P24752 427 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 TGFBR2P37173 567 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 PRKCEQ02156 737 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 AP3B2Q13367 1082 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF79Q15937 498 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 SPDYE7PQ495Y7 208 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 PRR5LQ6MZQ0 368 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 TAS2R42Q7RTR8 314 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM151BQ8IW70 566 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 MSRB3Q8IXL7 192 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ELMOD2Q8IZ81 293 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF567Q8N184 647 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 CCNYL1Q8N7R7 359 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 LGALS12Q96DT0 336 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 AURKBQ96GD4 344 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 KLHL15Q96M94 604 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 MCCC1Q96RQ3 725 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 NAP1L4Q99733 375 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 CHID1Q9BWS9 393 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 EIF2AQ9BY44 585 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 ZBTB20Q9HC78 741 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 FBXO8Q9NRD0 319 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 RABL2AQ9UBK7 228 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 OPTCQ9UBM4 332 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 SUCOQ9UBS9 1254 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 DNMT3LQ9UJW3 386 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 GGA1Q9UJY5 639 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 B3GNT3Q9Y2A9 372 aa4.53□□□□□ -1.68
DEPDC1-202ENST00000456315 DHRS12A0PJE2 317 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 TMEM229AB2RXF0 380 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 TRIM38O00635 465 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 CHADO15335 359 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 NUAK1O60285 661 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 PMPCBO75439 489 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 WBP4O75554 376 aaKnown RBP4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 SRP72O76094 671 aaKnown RBP4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 PRSS56P0CW18 603 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 JUNBP17275 347 aaPredicted RBP4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 STK11Q15831 433 aa4.53□□□□□ -1.69
DEPDC1-202ENST00000456315 GTDC1Q4AE62 458 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms