RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 E2F1Q01094 437 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 INSM1Q01101 510 aaPredicted RBP17.26■□□□□ 0.35
USP39-208ENST00000455732 C1orf61Q13536 156 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 DEFB133Q30KQ1 61 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 ANKRD20A2Q5SQ80 823 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 C6orf132Q5T0Z8 1188 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 ANKRD20A1Q5TYW2 823 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 ANKRD20A3Q5VUR7 823 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 LVRNQ6Q4G3 990 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 TMC3Q7Z5M5 1100 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 PROSER1Q86XN7 944 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 KLHDC8BQ8IXV7 354 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 CACTIN-AS1Q8N1I8 211 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 PDCD7Q8N8D1 485 aaKnown RBP17.26■□□□□ 0.35
USP39-208ENST00000455732 WDR24Q96S15 920 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 GORASP1Q9BQQ3 440 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 RIOK2Q9BVS4 552 aaKnown RBP17.26■□□□□ 0.35
USP39-208ENST00000455732 BOCQ9BWV1 1114 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 FRMD8P1Q9BZ68 369 aaPredicted RBP17.26■□□□□ 0.35
USP39-208ENST00000455732 TRABDQ9H4I3 376 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 RAD18Q9NS91 495 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 EVA1BQ9NVM1 165 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 DKK4Q9UBT3 224 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 SLC17A4Q9Y2C5 497 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 R3HDM2Q9Y2K5 976 aaKnown RBP17.26■□□□□ 0.35
USP39-208ENST00000455732 TCRBV7S2A1N4TA0A589 114 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 PRSS38A1L453 326 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 GOLGA6CA6NDK9 693 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 GOLGA6BA6NDN3 693 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 C5orf60A6NFR6 353 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 YY2O15391 372 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 ANXA9O76027 345 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 CEACAM5P06731 702 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 GP1BAP07359 652 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 ANXA6P08133 673 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 CELA2BP08218 269 aaPredicted RBP17.25■□□□□ 0.35
USP39-208ENST00000455732 GOLGA6DP0CG33 693 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 CTSEP14091 401 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 DUSP3P51452 185 aaPredicted RBP17.25■□□□□ 0.35
USP39-208ENST00000455732 GEMP55040 296 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 SLC1A5Q15758 541 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 SIRPB2Q5JXA9 342 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 SLC13A5Q86YT5 568 aaPredicted RBP17.25■□□□□ 0.35
USP39-208ENST00000455732 IPMKQ8NFU5 416 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 MDM1Q8TC05 714 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 SCARF2Q96GP6 870 aaPredicted RBP17.25■□□□□ 0.35
USP39-208ENST00000455732 COX14Q96I36 57 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 AGAP2Q99490 1192 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 FAM83DQ9H4H8 585 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 CCDC86Q9H6F5 360 aaKnown RBP17.25■□□□□ 0.35
USP39-208ENST00000455732 GOLGA6AQ9NYA3 693 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 AAR2Q9Y312 384 aaKnown RBP17.25■□□□□ 0.35
USP39-208ENST00000455732 LAMA5O15230 3695 aa17.25■□□□□ 0.35
USP39-208ENST00000455732 UNC13CQ8NB66 2214 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 CELSR3Q9NYQ7 3312 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 EME2A4GXA9 379 aaPredicted RBP17.24■□□□□ 0.35
USP39-208ENST00000455732 FGF1P05230 155 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 IVLP07476 585 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 PIRTP0C851 137 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 TARDBPQ13148 414 aaKnown RBP eCLIP17.24■□□□□ 0.35
USP39-208ENST00000455732 RD3Q7Z3Z2 195 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 GKN2Q86XP6 184 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 DCBLD1Q8N8Z6 715 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 CCDC110Q8TBZ0 833 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 HIC2Q96JB3 615 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 FSD1LQ9BXM9 530 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 GPR63Q9BZJ6 419 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 MRPL40Q9NQ50 206 aaKnown RBP17.24■□□□□ 0.35
USP39-208ENST00000455732 HACD3Q9P035 362 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 SHOC2Q9UQ13 582 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 SPO11Q9Y5K1 396 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 KIF26BQ2KJY2 2108 aa17.24■□□□□ 0.35
USP39-208ENST00000455732 F5H423 210 aaPredicted RBP17.23■□□□□ 0.35
USP39-208ENST00000455732 OPA1O60313 960 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 PSMB4P28070 264 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 ADRA1AP35348 466 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 HMGCLP35914 325 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 PRPSAP1Q14558 356 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 CDCP2Q5VXM1 449 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 PDPK2PQ6A1A2 396 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 SLC35F3Q8IY50 421 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 FAM71DQ8N9W8 422 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 IFI44Q8TCB0 444 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 SCG3Q8WXD2 468 aaKnown RBP17.23■□□□□ 0.35
USP39-208ENST00000455732 GLMNQ92990 594 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 RTP4Q96DX8 246 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 PDLIM2Q96JY6 352 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 ZSCAN5AQ9BUG6 496 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 TLR10Q9BXR5 811 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 CYP4F12Q9HCS2 524 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 TRNAU1APQ9NX07 287 aaKnown RBP17.23■□□□□ 0.35
USP39-208ENST00000455732 CNOT6Q9ULM6 557 aaKnown RBP17.23■□□□□ 0.35
USP39-208ENST00000455732 CLCA2Q9UQC9 943 aa17.23■□□□□ 0.35
USP39-208ENST00000455732 ITPR1Q14643 2758 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 FADS2P1A8MWK0 482 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 LIASO43766 372 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 FUCA1P04066 466 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 CHRNA4P43681 627 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 RPIAP49247 311 aa17.22■□□□□ 0.35
USP39-208ENST00000455732 CYP4F3Q08477 520 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms