RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 SLC12A9Q9BXP2 914 aa10.11□□□□□ -0.79
LINC01004-202ENST00000450686 ARFGAP3Q9NP61 516 aa10.11□□□□□ -0.79
LINC01004-202ENST00000450686 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.11□□□□□ -0.79
LINC01004-202ENST00000450686 KCNK4Q9NYG8 393 aa10.11□□□□□ -0.79
LINC01004-202ENST00000450686 KLHL3Q9UH77 587 aa10.11□□□□□ -0.79
LINC01004-202ENST00000450686 OAS3Q9Y6K5 1087 aaKnown RBP10.11□□□□□ -0.79
LINC01004-202ENST00000450686 USP9YO00507 2555 aaPredicted RBP10.11□□□□□ -0.79
LINC01004-202ENST00000450686 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.1□□□□□ -0.79
LINC01004-202ENST00000450686 STMND1H3BQB6 276 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 H3BRJ5 948 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 NKX2-8O15522 239 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 ATP1A1P05023 1023 aaKnown RBP10.1□□□□□ -0.79
LINC01004-202ENST00000450686 RARAP10276 462 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 THRAP10827 490 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 MMP13P45452 471 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 LIMK2P53671 638 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 DSC2Q02487 901 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 ITKQ08881 620 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 NFATC2Q13469 925 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 RFTN1Q14699 578 aaPredicted RBP10.1□□□□□ -0.79
LINC01004-202ENST00000450686 NR1D2Q14995 579 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 IGFBP7Q16270 282 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 ZNF648Q5T619 568 aaPredicted RBP10.1□□□□□ -0.79
LINC01004-202ENST00000450686 SASS6Q6UVJ0 657 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 TMCO3Q6UWJ1 677 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 TECPR1Q7Z6L1 1165 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 CBARPQ8N350 705 aaPredicted RBP10.1□□□□□ -0.79
LINC01004-202ENST00000450686 ATPAF2Q8N5M1 289 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 IL22RA1Q8N6P7 574 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 ZSCAN1Q8NBB4 408 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 ANKRD20A12PQ8NF67 263 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 PIH1D2Q8WWB5 315 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 OR2M4Q96R27 311 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 TAAR9Q96RI9 348 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 SEMA3CQ99985 751 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 RIOK2Q9BVS4 552 aaKnown RBP10.1□□□□□ -0.79
LINC01004-202ENST00000450686 BRD8Q9H0E9 1235 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 EPN3Q9H201 632 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 PCDH18Q9HCL0 1135 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 APMAPQ9HDC9 416 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 ZNF71Q9NQZ8 489 aaPredicted RBP10.1□□□□□ -0.79
LINC01004-202ENST00000450686 ANO10Q9NW15 660 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 TRNAU1APQ9NX07 287 aaKnown RBP10.1□□□□□ -0.79
LINC01004-202ENST00000450686 SLC39A1Q9NY26 324 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 SLC17A4Q9Y2C5 497 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 TTLL3Q9Y4R7 772 aa10.1□□□□□ -0.79
LINC01004-202ENST00000450686 PDE2AO00408 941 aaPredicted RBP10.09□□□□□ -0.79
LINC01004-202ENST00000450686 MFSD11O43934 449 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 RAD1O60671 282 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 SOCS5O75159 536 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 PPFIA2O75334 1257 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 ASMTLO95671 621 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 IVLP07476 585 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 CYP2A6P11509 494 aaPredicted RBP10.09□□□□□ -0.79
LINC01004-202ENST00000450686 DESP17661 470 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 CSTF2P33240 577 aaKnown RBP eCLIP10.09□□□□□ -0.796e-6■■■□□ 16.8
LINC01004-202ENST00000450686 RENBPP51606 427 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 POLE2P56282 527 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 PTSQ03393 145 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 DPYSL2Q16555 572 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 PYCR3Q53H96 274 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 ARMC12Q5T9G4 340 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 TMEM164Q5U3C3 297 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 CACNA2D3Q8IZS8 1091 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 TMEM159Q96B96 161 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 AP2M1Q96CW1 435 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 ZNF599Q96NL3 588 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 MCCC1Q96RQ3 725 aaPredicted RBP10.09□□□□□ -0.79
LINC01004-202ENST00000450686 AKAP7Q9P0M2 348 aaPredicted RBP10.09□□□□□ -0.79
LINC01004-202ENST00000450686 TBC1D29Q9UFV1 150 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 PHTF1Q9UMS5 762 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 KCNK6Q9Y257 313 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 CHKBQ9Y259 395 aa10.09□□□□□ -0.79
LINC01004-202ENST00000450686 MRPS18BQ9Y676 258 aaKnown RBP10.09□□□□□ -0.79
LINC01004-202ENST00000450686 ZNF106Q9H2Y7 1883 aaKnown RBP10.08□□□□□ -0.8
LINC01004-202ENST00000450686 LOC101059948A0A1B0GTJ6 334 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 FADS2P1A8MWK0 482 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.08□□□□□ -0.8
LINC01004-202ENST00000450686 HGSO14964 777 aaPredicted RBP10.08□□□□□ -0.8
LINC01004-202ENST00000450686 SNX2O60749 519 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 CLDN7O95471 211 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 ACP5P13686 325 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 NR1D1P20393 614 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 ARL4AP40617 200 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 SSR1P43307 286 aaKnown RBP10.08□□□□□ -0.8
LINC01004-202ENST00000450686 HCAR3P49019 387 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 ATP1A2P50993 1020 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 TYRO3Q06418 890 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 KCNAB2Q13303 367 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 PLA2G4EQ3MJ16 856 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 ANO6Q4KMQ2 910 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 ATP13A4Q4VNC1 1196 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 BORAQ6PGQ7 559 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 ADAMTSL4Q6UY14 1074 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 USP45Q70EL2 814 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 CHST15Q7LFX5 561 aaPredicted RBP10.08□□□□□ -0.8
LINC01004-202ENST00000450686 TIPARPQ7Z3E1 657 aaKnown RBP10.08□□□□□ -0.8
LINC01004-202ENST00000450686 GALNT13Q8IUC8 556 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 BMPERQ8N8U9 685 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms