RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SLX4Q8IY92 1834 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 KRT87PA6NCN2 255 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 PABPN1LA6NDY0 278 aaKnown RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 PTGES3LE9PB15 166 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 DDX39AO00148 427 aaKnown RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 SCAMP3O14828 347 aaKnown RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 HNRNPDLO14979 420 aaKnown RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 NOS1APO75052 506 aaPredicted RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 PRKD3O94806 890 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ENDOD1O94919 500 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 C2P06681 752 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ARSAP15289 507 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 CYP2A7P20853 494 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 BCAR1P56945 870 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 B2MP61769 119 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 EMX1Q04741 257 aaPredicted RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 FOXD4Q12950 439 aaPredicted RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 TOP3AQ13472 1001 aaPredicted RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 TBRG1Q3YBR2 411 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ZNF404Q494X3 552 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 FAM102BQ5T8I3 360 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 NDUFAF5Q5TEU4 345 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 B3GNT9Q6UX72 402 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 NOXA1Q86UR1 476 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 RIOX2Q8IUF8 465 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 NLGN4XQ8N0W4 816 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 KIAA1958Q8N8K9 716 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 OR9I1Q8NGQ6 314 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 SPPL2BQ8TCT7 592 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 GTF2H4Q92759 462 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 SNAPC3Q92966 411 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 BIRC7Q96CA5 298 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 YIPF6Q96EC8 236 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 RNF157Q96PX1 679 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 PEBP4Q96S96 227 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 BDH2Q9BUT1 245 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 C1QTNF7Q9BXJ2 289 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 REXO4Q9GZR2 422 aaKnown RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 MMP27Q9H306 513 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 IL1RL2Q9HB29 575 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ATPIF1Q9UII2 106 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ANAPC2Q9UJX6 822 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 VANGL2Q9ULK5 521 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 PCDHB11Q9Y5F2 797 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 IRS2Q9Y4H2 1338 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ARID2Q68CP9 1835 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CCDC154A6NI56 674 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 H0Y626 953 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CTDSP2O14595 271 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 APOL1O14791 398 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 EXTL3O43909 919 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SSX4O60224 188 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 RPS6KA4O75676 772 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SOAT2O75908 522 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 DXOO77932 396 aaKnown RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 EPN2O95208 641 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ALPLP05186 524 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PGK2P07205 417 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ARP10275 920 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 MTHFD1P11586 935 aaKnown RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 AGXTP21549 392 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 TGM2P21980 687 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CFL1P23528 166 aaKnown RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 MGAT1P26572 445 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 NPTX2P47972 431 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 HCAR3P49019 387 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SERPINH1P50454 418 aaKnown RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 SESN2P58004 480 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 UBXN2AP68543 259 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ZNF45Q02386 682 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PICALMQ13492 652 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 DAG1Q14118 895 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ACOX1Q15067 660 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CTU2Q2VPK5 515 aaKnown RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 FAM214AQ32MH5 1076 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PTPN20Q4JDL3 420 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 TTC23Q5W5X9 447 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PRMT9Q6P2P2 845 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SYCE2Q6PIF2 218 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ILDR2Q71H61 639 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 VN1R5Q7Z5H4 357 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 STRA8Q7Z7C7 330 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SLC51AQ86UW1 340 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 FAM35AQ86V20 835 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 WDR49Q8IV35 697 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SYTL1Q8IYJ3 562 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CLEC4FQ8N1N0 589 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PAPD5Q8NDF8 572 aaKnown RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 DCAF4Q8WV16 495 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 LGALS12Q96DT0 336 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ZHX1-C8orf76Q96EF9 292 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CERS2Q96G23 380 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CCDC120Q96HB5 630 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 GAD1Q99259 594 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SLC30A3Q99726 388 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 HOPXQ9BPY8 73 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 C17orf62Q9BQA9 187 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ZSCAN5AQ9BUG6 496 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 RHOBTB2Q9BYZ6 727 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms