RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 NLRP11P59045 1033 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 GPX6P59796 221 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PTENP60484 403 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 EIF4A1P60842 406 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 RAB1AP62820 205 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 POU6F2P78424 691 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 NKX6-1P78426 367 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 JAG1P78504 1218 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TNFAIP2Q03169 654 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZP2Q05996 745 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MGAT3Q09327 533 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MGAT2Q10469 447 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 BNIP3Q12983 259 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 DHX34Q14147 1143 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF846Q147U1 533 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MORF4L2Q15014 288 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PLCL1Q15111 1095 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 NR0B2Q15466 257 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TSC22D1Q15714 1073 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LTB4RQ15722 352 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TBCCQ15814 346 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSMD5Q16401 504 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ASIC2Q16515 512 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TAF1BQ53T94 588 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 BRMS1LQ5PSV4 323 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PPM1LQ5SGD2 360 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 RBM20Q5T481 1227 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PXDC1Q5TGL8 231 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MEX3CQ5U5Q3 659 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 IRAK1BP1Q5VVH5 260 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CD276Q5ZPR3 534 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TPGS2Q68CL5 300 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TTC27Q6P3X3 843 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FOXR2Q6PJQ5 311 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LMBR1LQ6UX01 489 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LDHAL6AQ6ZMR3 332 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PRR23BQ6ZRT6 265 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLC16A12Q6ZSM3 486 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TOM1L2Q6ZVM7 507 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TRMT10CQ7L0Y3 403 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TAS2R42Q7RTR8 314 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CATSPER4Q7RTX7 472 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 GPR155Q7Z3F1 870 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF589Q86UQ0 364 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 KBTBD6Q86V97 674 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PROSER1Q86XN7 944 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TDRPQ86YL5 185 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 UNC45BQ8IWX7 931 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 DIS3L2Q8IYB7 885 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ULK2Q8IYT8 1036 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 RCOR2Q8IZ40 523 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TAGAPQ8N103 731 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TCAIMQ8N3R3 496 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLC15A4Q8N697 577 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRRC57Q8N9N7 239 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TEX19Q8NA77 164 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FNDC5Q8NAU1 212 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 GLB1L3Q8NCI6 653 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR2I1PQ8NGU4 316 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 OR6F1Q8NGZ6 308 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 DTX3LQ8TDB6 740 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 NSUN6Q8TEA1 469 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FNIP1Q8TF40 1166 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 UBLCP1Q8WVY7 318 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 YIPF5Q969M3 257 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 KIAA1191Q96A73 305 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 RGMAQ96B86 450 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CHFRQ96EP1 664 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PEX11GQ96HA9 241 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MS4A14Q96JA4 679 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FEM1CQ96JP0 617 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMEM68Q96MH6 324 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 DACH2Q96NX9 599 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 SELENOSQ9BQE4 189 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 BCL7BQ9BQE9 202 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMEM79Q9BSE2 394 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 C1orf50Q9BV19 199 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ADI1Q9BV57 179 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 HEMGNQ9BXL5 484 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 NUSAP1Q9BXS6 441 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LMAN2LQ9H0V9 348 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MTG2Q9H4K7 406 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ATP13A3Q9H7F0 1226 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 NANOGQ9H9S0 305 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZMAT3Q9HA38 289 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MLXIPQ9HAP2 919 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 STARD7Q9NQZ5 370 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FBXO8Q9NRD0 319 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 OLFML3Q9NRN5 406 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ARL8BQ9NVJ2 186 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 SYBUQ9NX95 663 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 SAGE1Q9NXZ1 904 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 B3GNT2Q9NY97 397 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 GRHL1Q9NZI5 618 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ARHGAP20Q9P2F6 1191 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CPNE7Q9UBL6 633 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FTSJ1Q9UET6 329 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRWD1Q9UFC0 647 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 BCAP29Q9UHQ4 241 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms