RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RGSL1A5PLK6 1076 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 FADS2P1A8MWK0 482 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 INPP4BO15327 924 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 ARHGAP6O43182 974 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 EPOP01588 193 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 PYGLP06737 847 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 RBP3P10745 1247 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 GNPDA1P46926 289 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 CYP4F3Q08477 520 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 HENMT1Q5T8I9 393 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 DARS2Q6PI48 645 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 DOK6Q6PKX4 331 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 NRROSQ86YC3 692 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 SFTPA2Q8IWL1 248 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 LRRC8AQ8IWT6 810 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 SLC25A41Q8N5S1 370 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 ARL10Q8N8L6 244 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 GPR26Q8NDV2 337 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 GPR156Q8NFN8 814 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 MAPK15Q8TD08 544 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 GPBAR1Q8TDU6 330 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 NAT6Q93015 286 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 HES6Q96HZ4 224 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 MRGPRX2Q96LB1 330 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 GPR63Q9BZJ6 419 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 CCDC86Q9H6F5 360 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 SPATS2LQ9NUQ6 558 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 TRNAU1APQ9NX07 287 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 RSPH14Q9UHP6 348 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 GUCA1BQ9UMX6 200 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 ZNF711Q9Y462 761 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 SPO11Q9Y5K1 396 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 ST14Q9Y5Y6 855 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 FRYQ5TBA9 3013 aa12.67□□□□□ -0.38
PRPF40A-203ENST00000448428 AURKAO14965 403 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 CASC3O15234 703 aaKnown RBP12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 KCNN4O15554 427 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 NOBOXO60393 691 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 ATP1A1P05023 1023 aaKnown RBP12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 IVLP07476 585 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 AK4P27144 223 aaPredicted RBP12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 ADCY8P40145 1251 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 CHRNA4P43681 627 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 MPP3Q13368 585 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 SIRPB2Q5JXA9 342 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 ANKRD20A2Q5SQ80 823 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 ANKRD20A1Q5TYW2 823 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 ANKRD20A3Q5VUR7 823 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 CDKL3Q8IVW4 592 aaPredicted RBP12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 CCDC112Q8NEF3 446 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 GORASP1Q9BQQ3 440 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 TSGA10Q9BZW7 698 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 GBA3Q9H227 469 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 DPEP2Q9H4A9 486 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 RABGEF1Q9UJ41 708 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 PLEKHM1Q9Y4G2 1056 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 GPSM3Q9Y4H4 160 aa12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 OAS3Q9Y6K5 1087 aaKnown RBP12.66□□□□□ -0.38
PRPF40A-203ENST00000448428 TCRBV7S2A1N4TA0A589 114 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 SRRM3A6NNA2 597 aaPredicted RBP12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 KRT86O43790 486 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 ASMTLO95671 621 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 AGTP01019 485 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 SLC4A1P02730 911 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 FGF1P05230 155 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 BPIP17213 487 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 CTBSQ01459 385 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 ILF3Q12906 894 aaKnown RBP eCLIP12.65□□□□□ -0.386e-10■■■■■ 32.4
PRPF40A-203ENST00000448428 KLF1Q13351 362 aaPredicted RBP12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 SLC1A5Q15758 541 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 PYCR3Q53H96 274 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 MARK2Q7KZI7 788 aaKnown RBP12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 PROSER1Q86XN7 944 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 IPMKQ8NFU5 416 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 CCDC110Q8TBZ0 833 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 CCDC74AQ96AQ1 378 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 SRPK1Q96SB4 655 aaKnown RBP12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 CCDC3Q9BQI4 270 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 FERMT1Q9BQL6 677 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 SPATA16Q9BXB7 569 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 GSDMCQ9BYG8 508 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 NRSN2Q9GZP1 204 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 BPIFA1Q9NP55 256 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 TAAR2Q9P1P5 351 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 DKK4Q9UBT3 224 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 ZNHIT2Q9UHR6 403 aa12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 PCYT1BQ9Y5K3 369 aaPredicted RBP12.65□□□□□ -0.38
PRPF40A-203ENST00000448428 UNC13CQ8NB66 2214 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 GOLGA6L9A6NEM1 432 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 B4DGG1 531 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 DNAJC6O75061 913 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 CSO75390 466 aaKnown RBP12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 KRT37O76014 449 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 PTMAP06454 111 aaKnown RBP12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 GEMP55040 296 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 DCDC1P59894 354 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 RTP5Q14D33 572 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 C14orf28Q4W4Y0 310 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 ZNF648Q5T619 568 aaPredicted RBP12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 ALS2CLQ60I27 953 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms