RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 HLA-DQB2P05538 268 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 ZNF30P17039 623 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 MPSTP25325 297 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 GPR3P46089 330 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 GBE1Q04446 702 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 NIPAL4Q0D2K0 466 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 IFI16Q16666 785 aaKnown RBP28.12■■■□□ 2.09
CBX4-202ENST00000448310 LINC00303Q3SY05 128 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 PYCR3Q53H96 274 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 ZNF765Q7L2R6 523 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 EXD3Q8N9H8 876 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 LPCAT1Q8NF37 534 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 ARRDC2Q8TBH0 407 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 PMEPA1Q969W9 287 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 ZNF670Q9BS34 389 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 NENFQ9UMX5 172 aa28.12■■■□□ 2.09
CBX4-202ENST00000448310 LUC7L2Q9Y383 392 aaKnown RBP28.12■■■□□ 2.09
CBX4-202ENST00000448310 PCYT1BQ9Y5K3 369 aaPredicted RBP28.12■■■□□ 2.09
CBX4-202ENST00000448310 PYCARD-AS1I3L0S3 204 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 ZW10O43264 779 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 WT1P19544 449 aaPredicted RBP28.11■■■□□ 2.09
CBX4-202ENST00000448310 CCNCP24863 283 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 CSF2RBP32927 897 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 ZNF761Q86XN6 746 aaPredicted RBP28.11■■■□□ 2.09
CBX4-202ENST00000448310 DTX1Q86Y01 620 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 JPH3Q8WXH2 748 aaPredicted RBP28.11■■■□□ 2.09
CBX4-202ENST00000448310 EXTL1Q92935 676 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 TMEM9Q9P0T7 183 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 CTTNBP2NLQ9P2B4 639 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 PRKAB1Q9Y478 270 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 PCDHB11Q9Y5F2 797 aa28.11■■■□□ 2.09
CBX4-202ENST00000448310 IGHV1OR21-1A0A087WYE8 117 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 PROSCO94903 275 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 ASMTLO95671 621 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 LIMK2P53671 638 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 PEX6Q13608 980 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 CLPPQ16740 277 aaPredicted RBP28.1■■■□□ 2.09
CBX4-202ENST00000448310 TMEM164Q5U3C3 297 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 GALNT13Q8IUC8 556 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 PQLC3Q8N755 202 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 EXD1Q8NHP7 514 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 COX14Q96I36 57 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 TSGA13Q96PP4 275 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 PACSIN1Q9BY11 444 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 KCNK4Q9NYG8 393 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 PCDHGA4Q9Y5G9 962 aa28.1■■■□□ 2.09
CBX4-202ENST00000448310 ASH1LQ9NR48 2969 aaKnown RBP28.09■■■□□ 2.09
CBX4-202ENST00000448310 HGSO14964 777 aaPredicted RBP28.09■■■□□ 2.09
CBX4-202ENST00000448310 EML2O95834 649 aa28.09■■■□□ 2.09
CBX4-202ENST00000448310 ATP1A1P05023 1023 aaKnown RBP28.09■■■□□ 2.09
CBX4-202ENST00000448310 FGF3P11487 239 aaPredicted RBP28.09■■■□□ 2.09
CBX4-202ENST00000448310 SLC10A2Q12908 348 aaPredicted RBP28.09■■■□□ 2.09
CBX4-202ENST00000448310 PDK2Q15119 407 aa28.09■■■□□ 2.09
CBX4-202ENST00000448310 FAM182AQ5T1J6 154 aa28.09■■■□□ 2.09
CBX4-202ENST00000448310 NLRP8Q86W28 1048 aa28.09■■■□□ 2.09
CBX4-202ENST00000448310 NRSN1Q8IZ57 195 aa28.09■■■□□ 2.09
CBX4-202ENST00000448310 PCDH9Q9HC56 1237 aa28.09■■■□□ 2.09
CBX4-202ENST00000448310 IFNKQ9P0W0 207 aa28.09■■■□□ 2.09
CBX4-202ENST00000448310 OAS3Q9Y6K5 1087 aaKnown RBP28.09■■■□□ 2.09
CBX4-202ENST00000448310 PYGLP06737 847 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 CES1P23141 567 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 CD82P27701 267 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 CASP14P31944 242 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 ARSDP51689 593 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 CYP4F2P78329 520 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 OR4D9Q8NGE8 314 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 SLC37A2Q8TED4 501 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 FATE1Q969F0 183 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 FAF2Q96CS3 445 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 IQCDQ96DY2 449 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 WDR24Q96S15 920 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 ZMYND15Q9H091 742 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 AMACRQ9UHK6 382 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 ZNHIT2Q9UHR6 403 aa28.08■■■□□ 2.09
CBX4-202ENST00000448310 THRAP10827 490 aa28.07■■■□□ 2.08
CBX4-202ENST00000448310 CA4P22748 312 aa28.07■■■□□ 2.08
CBX4-202ENST00000448310 PPM1FP49593 454 aaPredicted RBP28.07■■■□□ 2.08
CBX4-202ENST00000448310 ZFYVE27Q5T4F4 411 aa28.07■■■□□ 2.08
CBX4-202ENST00000448310 CCNYQ8ND76 341 aa28.07■■■□□ 2.08
CBX4-202ENST00000448310 TAAR9Q96RI9 348 aa28.07■■■□□ 2.08
CBX4-202ENST00000448310 ARHGAP9Q9BRR9 750 aa28.07■■■□□ 2.08
CBX4-202ENST00000448310 HAUS2Q9NVX0 235 aa28.07■■■□□ 2.08
CBX4-202ENST00000448310 DNPEPQ9ULA0 475 aa28.07■■■□□ 2.08
CBX4-202ENST00000448310 CNOT6Q9ULM6 557 aaKnown RBP28.07■■■□□ 2.08
CBX4-202ENST00000448310 C1orf232A0A0U1RR37 186 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 GOLGA6L19H0YKK7 550 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 DNAJC6O75061 913 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 CD86P42081 329 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 TRA2AQ13595 282 aaKnown RBP eCLIP28.06■■■□□ 2.08
CBX4-202ENST00000448310 LRP8Q14114 963 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 CHST15Q7LFX5 561 aaPredicted RBP28.06■■■□□ 2.08
CBX4-202ENST00000448310 MAP7D3Q8IWC1 876 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 CCDC13Q8IYE1 715 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 RAPGEF5Q92565 580 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 ART4Q93070 314 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 HDAC11Q96DB2 347 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 LYSMD1Q96S90 227 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 SLC38A3Q99624 504 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 B3GNT4Q9C0J1 378 aa28.06■■■□□ 2.08
CBX4-202ENST00000448310 DTLQ9NZJ0 730 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms