RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 PLEKHG4BQ96PX9 1271 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 C19orf43Q9BQ61 176 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 ORAI3Q9BRQ5 295 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 NAT9Q9BTE0 207 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 RIOK2Q9BVS4 552 aaKnown RBP11.54□□□□□ -0.56
LINC00408-201ENST00000447784 GTPBP2Q9BX10 602 aaKnown RBP11.54□□□□□ -0.56
LINC00408-201ENST00000447784 SPATA16Q9BXB7 569 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 ABCG8Q9H221 673 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 TM9SF3Q9HD45 589 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 FSCN3Q9NQT6 498 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 CHRAC1Q9NRG0 131 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 SYBUQ9NX95 663 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 GRHL1Q9NZI5 618 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 IL17CQ9P0M4 197 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 DMGDHQ9UI17 866 aaKnown RBP11.54□□□□□ -0.56
LINC00408-201ENST00000447784 APPL1Q9UKG1 709 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 KCTD3Q9Y597 815 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 HS3ST3A1Q9Y663 406 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 MROH6A6NGR9 719 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 A6NNZ2 444 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 RAD51BO15315 384 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 KCNK5O95279 499 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 POLBP06746 335 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 ADRB1P08588 477 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 CEACAM1P13688 526 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 TSHRP16473 764 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 BPIP17213 487 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 HTR1BP28222 390 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 ZNF140P52738 457 aaPredicted RBP11.53□□□□□ -0.56
LINC00408-201ENST00000447784 THOP1P52888 689 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 C21orf59P57076 290 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 CLDN2P57739 230 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 DCDC1P59894 354 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 PRAMEP78395 509 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 DPTQ07507 201 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 DHX9Q08211 1270 aaKnown RBP11.53□□□□□ -0.56
LINC00408-201ENST00000447784 PDIA2Q13087 525 aaKnown RBP11.53□□□□□ -0.56
LINC00408-201ENST00000447784 MSLNQ13421 630 aaPredicted RBP11.53□□□□□ -0.56
LINC00408-201ENST00000447784 INPP5AQ14642 412 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 IRF4Q15306 451 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 UAP1L1Q3KQV9 507 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 FNBP1LQ5T0N5 605 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 PNCKQ6P2M8 343 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 FAM151BQ6UXP7 276 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 RFLNAQ6ZTI6 216 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 NLRP8Q86W28 1048 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 CCDC25Q86WR0 208 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 LRRN4CLQ8ND94 238 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 GPR26Q8NDV2 337 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 OR6P1Q8NGX9 317 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 FBXO25Q8TCJ0 367 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 SEC14L1Q92503 715 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 PEX13Q92968 403 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 SCAMP4Q969E2 229 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 CENPTQ96BT3 561 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 EID2BQ96D98 161 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 LRRC39Q96DD0 335 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 KLHDC7BQ96G42 594 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 DNAJC1Q96KC8 554 aaKnown RBP11.53□□□□□ -0.56
LINC00408-201ENST00000447784 SLC6A18Q96N87 628 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 TTC1Q99614 292 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 ZSCAN5AQ9BUG6 496 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 KIFC1Q9BW19 673 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 WDR26Q9H7D7 661 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 MRM3Q9HC36 420 aaKnown RBP11.53□□□□□ -0.56
LINC00408-201ENST00000447784 FZD3Q9NPG1 666 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 IL26Q9NPH9 171 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 NLE1Q9NVX2 485 aaPredicted RBP11.53□□□□□ -0.56
LINC00408-201ENST00000447784 ZC3H7BQ9UGR2 993 aaKnown RBP11.53□□□□□ -0.56
LINC00408-201ENST00000447784 RIMKLBQ9ULI2 386 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 SLC30A1Q9Y6M5 507 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 THADAQ6YHU6 1953 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 SPAG17Q6Q759 2223 aa11.53□□□□□ -0.56
LINC00408-201ENST00000447784 FAM237BA0A1B0GVD1 139 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 CACNB4O00305 520 aaPredicted RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 TOR1BO14657 336 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 VILLO15195 856 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 EIF3HO15372 352 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 TTC4O95801 387 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 CER1O95813 267 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 ZNF883P0CG24 379 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 PGAM1P18669 254 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 ITGALP20701 1170 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 KELP23276 732 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 MCM3P25205 808 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 CD38P28907 300 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 MAGEA3P43357 314 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 RABIFP47224 123 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 CSNK1EP49674 416 aaKnown RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 NOVA1P51513 510 aaKnown RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 BNC1Q01954 994 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 OVGP1Q12889 678 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 ITGA9Q13797 1035 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 PTPRCAPQ14761 206 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 TRADDQ15628 312 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 HP1BP3Q5SSJ5 553 aaPredicted RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 PDPK2PQ6A1A2 396 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 ESRP1Q6NXG1 681 aaKnown RBP11.52□□□□□ -0.57
LINC00408-201ENST00000447784 Q6ZSR6 202 aa11.52□□□□□ -0.57
LINC00408-201ENST00000447784 TAS2R42Q7RTR8 314 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms