RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 RAG1P15918 1043 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 FMO4P31512 558 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 ATP4BP51164 291 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 SH3BP2P78314 561 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 GSTA3Q16772 222 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 NCEH1Q6PIU2 408 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 PAQR3Q6TCH7 311 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 ANKRD33Q7Z3H0 272 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 RAB44Q7Z6P3 723 aaPredicted RBP16.22■□□□□ 0.19
OTUB1-204ENST00000447683 HERC6Q8IVU3 1022 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 UCMAQ8WVF2 138 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 ZFRQ96KR1 1074 aaKnown RBP16.22■□□□□ 0.19
OTUB1-204ENST00000447683 SMIM14Q96QK8 99 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 NPAS2Q99743 824 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 PPP1R12CQ9BZL4 782 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 MUC3BQ9H195 1237 aa16.22■□□□□ 0.19
OTUB1-204ENST00000447683 PSMD12O00232 456 aaPredicted RBP16.21■□□□□ 0.19
OTUB1-204ENST00000447683 GPC4O75487 556 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 NDUFS3O75489 264 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 SRP72O76094 671 aaKnown RBP16.21■□□□□ 0.19
OTUB1-204ENST00000447683 TMCC1O94876 653 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 C1RP00736 705 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 XRCC1P18887 633 aaPredicted RBP16.21■□□□□ 0.19
OTUB1-204ENST00000447683 TSPAN8P19075 237 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 CD9P21926 228 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 PSMD8P48556 350 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 CDH13P55290 713 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 ATP6V0D1P61421 351 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 XIAPP98170 497 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 TRAF2Q12933 501 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 STX5Q13190 355 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 FASTKQ14296 549 aaKnown RBP16.21■□□□□ 0.19
OTUB1-204ENST00000447683 TAF12Q16514 161 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 STAG3L4Q8TBR4 150 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 GATA6Q92908 595 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 EXT2Q93063 718 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 BIRC8Q96P09 236 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 ADGRE3Q9BY15 652 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 MRPL1Q9BYD6 325 aaKnown RBP16.21■□□□□ 0.19
OTUB1-204ENST00000447683 VCXQ9H320 206 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 VCX3BQ9H321 246 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 LHX3Q9UBR4 397 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 SARDHQ9UL12 918 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 PSMD13Q9UNM6 376 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 VPS9D1Q9Y2B5 631 aa16.21■□□□□ 0.19
OTUB1-204ENST00000447683 OAS3Q9Y6K5 1087 aaKnown RBP16.21■□□□□ 0.19
OTUB1-204ENST00000447683 EIF4E1BA6NMX2 242 aaKnown RBP16.2■□□□□ 0.18
OTUB1-204ENST00000447683 CFLARO15519 480 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 SNAP91O60641 907 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 SIX3O95343 332 aaPredicted RBP16.2■□□□□ 0.18
OTUB1-204ENST00000447683 ME2P23368 584 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 PKNOX1P55347 436 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 VEPH1Q14D04 833 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 INO80DQ53TQ3 878 aaPredicted RBP16.2■□□□□ 0.18
OTUB1-204ENST00000447683 TMEM150AQ86TG1 271 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 PDSS2Q86YH6 399 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 TTC30BQ8N4P2 665 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 C19orf60Q96EN9 201 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 CCDC68Q9H2F9 335 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 BCAP29Q9UHQ4 241 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 H7C0S8 307 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 GFRA2O00451 464 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 CDKN1CP49918 316 aaPredicted RBP16.2■□□□□ 0.18
OTUB1-204ENST00000447683 RAD51Q06609 339 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 RAB33AQ14088 237 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 LRP8Q14114 963 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 PFKFB4Q16877 469 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 DNAJB7Q7Z6W7 309 aaPredicted RBP16.2■□□□□ 0.18
OTUB1-204ENST00000447683 PIANPQ8IYJ0 282 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 C3orf30Q96M34 536 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 NR1H4Q96RI1 486 aaPredicted RBP16.2■□□□□ 0.18
OTUB1-204ENST00000447683 HERC2P3Q9BVR0 1158 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 OGDHLQ9ULD0 1010 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 FAM50BQ9Y247 325 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 OR51B4Q9Y5P0 310 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 DNAJC15Q9Y5T4 150 aa16.2■□□□□ 0.18
OTUB1-204ENST00000447683 LRRC14BA6NHZ5 514 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 STX16-NPEPL1H3BU86 382 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 FBP2O00757 339 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 ATP6V1G1O75348 118 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 MZF1P28698 734 aaPredicted RBP16.19■□□□□ 0.18
OTUB1-204ENST00000447683 MS4A2Q01362 244 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 IKBKEQ14164 716 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 FLOT2Q14254 428 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 PTPRNQ16849 979 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 AGKQ53H12 422 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 LPCAT4Q643R3 524 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 PSAPL1Q6NUJ1 521 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 LINGO4Q6UY18 593 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 CCDC80Q76M96 950 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 SLC39A11Q8N1S5 342 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 GDPD5Q8WTR4 605 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 USP13Q92995 863 aaPredicted RBP16.19■□□□□ 0.18
OTUB1-204ENST00000447683 DEFB118Q96PH6 123 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 GPR21Q99679 349 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 KLHL4Q9C0H6 718 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 VCX3AQ9NNX9 186 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 HACD3Q9P035 362 aa16.19■□□□□ 0.18
OTUB1-204ENST00000447683 C6orf203Q9P0P8 240 aaPredicted RBP16.19■□□□□ 0.18
OTUB1-204ENST00000447683 FKBPLQ9UIM3 349 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms