RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 SUDS3Q9H7L9 328 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 SARS2Q9NP81 518 aaKnown RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 RCOR3Q9P2K3 495 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-203ENST00000447360 TMEM59LQ9UK28 342 aa7.05□□□□□ -1.28
LRRC28-203ENST00000447360 POLEQ07864 2286 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 HEATR9A2RTY3 570 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 A6NCN8 305 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 SOWAHDA6NJG2 315 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 FAM72CH0Y354 149 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 TOX3O15405 576 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 CEACAM4O75871 244 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 KIAA0754O94854 1291 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 PLEKP08567 350 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 FBXO45P0C2W1 286 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 ZNF28P17035 718 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 CDH5P33151 784 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 CSNK1DP48730 415 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 CCL11P51671 97 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 CDK3Q00526 305 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 HHEXQ03014 270 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 FOXM1Q08050 763 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 DNASE1L3Q13609 305 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 LRP8Q14114 963 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 ACOX1Q15067 660 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 UGT8Q16880 541 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 PARP15Q460N3 678 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 FAM72AQ5TYM5 149 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 SLC6A19Q695T7 634 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 FAM72DQ6L9T8 149 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 RBM43Q6ZSC3 357 aaKnown RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 FAM72BQ86X60 149 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 ZNF761Q86XN6 746 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 XYLT1Q86Y38 959 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 CREBRFQ8IUR6 639 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 RHOT1Q8IXI2 618 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 NETO2Q8NC67 525 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 TMEM35BQ8NCS4 154 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 NUS1Q96E22 293 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 COQ10AQ96MF6 247 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 OR2M4Q96R27 311 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 GPR87Q9BY21 358 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 KLC2Q9H0B6 622 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 ING2Q9H160 280 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 NUP62CLQ9H1M0 184 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 ACTL8Q9H568 366 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 STN1Q9H668 368 aaKnown RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 NOL6Q9H6R4 1146 aaKnown RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 SIX2Q9NPC8 291 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 ACSS2Q9NR19 701 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 MAP10Q9P2G4 905 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 UBA2Q9UBT2 640 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 G3BP2Q9UN86 482 aaKnown RBP7.04□□□□□ -1.28
LRRC28-203ENST00000447360 DCHS2Q6V1P9 2916 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 CHD5Q8TDI0 1954 aa7.04□□□□□ -1.28
LRRC28-203ENST00000447360 MN1Q10571 1320 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 PCNX1Q96RV3 2341 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 DOCK4Q8N1I0 1966 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 GTPBP10A4D1E9 387 aaKnown RBP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 ANKUB1A6NFN9 424 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 RASA4BC9J798 803 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 RASA4O43374 803 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 NDUFA10O95299 355 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 MAP3K6O95382 1288 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 C9P02748 559 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 FGF5P12034 268 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 LPOP22079 712 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 PON1P27169 355 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 PTPN4P29074 926 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 POLD2P49005 469 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 BPIFB4P59827 614 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 ATP11AP98196 1134 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 BCL2L1Q07817 233 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 NSUN2Q08J23 767 aaKnown RBP eCLIP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 PYCR3Q53H96 274 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 CT47A1Q5JQC4 288 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 MIIPQ5JXC2 388 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 TRNP1Q6NT89 227 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 CYB5D1Q6P9G0 228 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 IYDQ6PHW0 289 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 TRIM65Q6PJ69 517 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 LYPD8Q6UX82 237 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 SRLQ86TD4 932 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 SYVN1Q86TM6 617 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 SLC9B2Q86UD5 537 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 RASGRP3Q8IV61 690 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 MCEMP1Q8IX19 187 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 IQCKQ8N0W5 287 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 UMODL1-AS1Q8N2C9 162 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 CBARPQ8N350 705 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 RTL3Q8N8U3 475 aaKnown RBP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 AVL9Q8NBF6 648 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 SNRNP40Q96DI7 357 aaKnown RBP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 C19orf60Q96EN9 201 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 C9orf72Q96LT7 481 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 OR6C1Q96RD1 312 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 KCNK17Q96T54 332 aa7.03□□□□□ -1.28
LRRC28-203ENST00000447360 UNKQ9C0B0 810 aaKnown RBP7.03□□□□□ -1.28
LRRC28-203ENST00000447360 BRD8Q9H0E9 1235 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms