RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CDYLQ9Y232 598 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 PKP3Q9Y446 797 aa17.38■□□□□ 0.37
SMC6-206ENST00000446852 OAS3Q9Y6K5 1087 aaKnown RBP17.38■□□□□ 0.37
SMC6-206ENST00000446852 A0A0J9YYE9 177 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.37■□□□□ 0.37
SMC6-206ENST00000446852 UBXN8O00124 270 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 ARHGEF15O94989 841 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 TRBC1P01850 177 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 RHOP08100 348 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 PKMP14618 531 aaKnown RBP17.37■□□□□ 0.37
SMC6-206ENST00000446852 EPCAMP16422 314 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 COPAP53621 1224 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 MXRA7P84157 204 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 TMEM198Q66K66 360 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 PSRC1Q6PGN9 363 aaPredicted RBP17.37■□□□□ 0.37
SMC6-206ENST00000446852 CUZD1Q86UP6 607 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 ZSWIM9Q86XI8 627 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 RHEBL1Q8TAI7 183 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 WDR60Q8WVS4 1066 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 CLPTM1LQ96KA5 538 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 VPS9D1Q9Y2B5 631 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 FIS1Q9Y3D6 152 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 C5orf42Q9H799 3197 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 LINC01553A4QN01 128 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 MAGEC1O60732 1142 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 IGSF6O95976 241 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 PTPN2P17706 415 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 TSPAN8P19075 237 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 EN2P19622 333 aaPredicted RBP17.37■□□□□ 0.37
SMC6-206ENST00000446852 NTHL1P78549 312 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 SLC25A3Q00325 362 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 DNAL1Q4LDG9 190 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 UNC50Q53HI1 259 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 ACAD11Q709F0 780 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 OR2AP1Q8NGE2 309 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 GIMAP7Q8NHV1 300 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 MICAL1Q8TDZ2 1067 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 MAELQ96JY0 434 aaKnown RBP17.37■□□□□ 0.37
SMC6-206ENST00000446852 DERL2Q9GZP9 239 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 TFB2MQ9H5Q4 396 aaKnown RBP17.37■□□□□ 0.37
SMC6-206ENST00000446852 ZNF385DQ9H6B1 395 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 SYTL2Q9HCH5 934 aa17.37■□□□□ 0.37
SMC6-206ENST00000446852 PIKFYVEQ9Y2I7 2098 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 LOC100653049A0A140TA62 436 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 SDHDO14521 159 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 GAPDHSO14556 408 aaPredicted RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 SOCS5O75159 536 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 SMIM24O75264 130 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 SKAP2O75563 359 aaPredicted RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 KRT34O76011 436 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 PENKP01210 267 aaPredicted RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 RAP1GDS1P52306 607 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 RPL26P61254 145 aaKnown RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 HERVK_113P63132 956 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 KPNB1Q14974 876 aaKnown RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 TAS2R42Q7RTR8 314 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 DNAJC5GQ8N7S2 189 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 PTGR2Q8N8N7 351 aaPredicted RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 CMTM5Q96DZ9 223 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 CCDC97Q96F63 343 aaPredicted RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 ERVK-6Q9BXR3 956 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 ATP13A3Q9H7F0 1226 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 RNPEPL1Q9HAU8 725 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 G3BP2Q9UN86 482 aaKnown RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 HCFC2Q9Y5Z7 792 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 LRRC14BA6NHZ5 514 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 NEDD8-MDP1E9PL57 170 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 TM7SF2O76062 418 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 SUPT7LO94864 414 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 SIX3O95343 332 aaPredicted RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 COX4I1P13073 169 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 CA5AP35218 305 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 HNF1BP35680 557 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 MAPK8P45983 427 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 CACNG1Q06432 222 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 GALNT1Q10472 559 aaPredicted RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 CDKN3Q16667 212 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 SIDT2Q8NBJ9 832 aaKnown RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 HERVK_113Q902F9 699 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 KIAA1191Q96A73 305 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 FAM161BQ96MY7 647 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 THTPAQ9BU02 230 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 CCDC28BQ9BUN5 200 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 EML4Q9HC35 981 aaKnown RBP17.36■□□□□ 0.37
SMC6-206ENST00000446852 TDP1Q9NUW8 608 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 HS3ST2Q9Y278 367 aa17.36■□□□□ 0.37
SMC6-206ENST00000446852 C1orf232A0A0U1RR37 186 aa17.35■□□□□ 0.37
SMC6-206ENST00000446852 TSPAN12O95859 305 aa17.35■□□□□ 0.37
SMC6-206ENST00000446852 TPBGLP0DKB5 382 aa17.35■□□□□ 0.37
SMC6-206ENST00000446852 DDX6P26196 483 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMC6-206ENST00000446852 C1QTNF8P60827 252 aa17.35■□□□□ 0.37
SMC6-206ENST00000446852 BTKQ06187 659 aa17.35■□□□□ 0.37
SMC6-206ENST00000446852 RAD51Q06609 339 aa17.35■□□□□ 0.37
SMC6-206ENST00000446852 KHDC1Q4VXA5 237 aaKnown RBP17.35■□□□□ 0.37
SMC6-206ENST00000446852 AARS2Q5JTZ9 985 aaKnown RBP17.35■□□□□ 0.37
SMC6-206ENST00000446852 NXNQ6DKJ4 435 aa17.35■□□□□ 0.37
SMC6-206ENST00000446852 FAM151BQ6UXP7 276 aa17.35■□□□□ 0.37
SMC6-206ENST00000446852 METTL3Q86U44 580 aaKnown RBP17.35■□□□□ 0.37
SMC6-206ENST00000446852 ULK2Q8IYT8 1036 aa17.35■□□□□ 0.37
SMC6-206ENST00000446852 ARHGAP24Q8N264 748 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms