RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SMAPO00193 183 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 TNFRSF10CO14798 259 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 AURKAO14965 403 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 INPP4BO15327 924 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 FLRT2O43155 660 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 GDF9O60383 454 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 SLC25A14O95258 325 aaPredicted RBP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 BPIP17213 487 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 GM2AP17900 193 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 ADRA1DP25100 572 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 RXRGP48443 463 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 SESN2P58004 480 aaPredicted RBP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 SRP54P61011 504 aaKnown RBP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 PEX6Q13608 980 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 FZD2Q14332 565 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 DENND5AQ6IQ26 1287 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 CASC4Q6P4E1 433 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 LRRC8BQ6P9F7 803 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 RD3Q7Z3Z2 195 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 SPATS2Q86XZ4 545 aaKnown RBP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 JAMLQ86YT9 394 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 HID1Q8IV36 788 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 SLC22A18ASQ8N1D0 253 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 TTC30BQ8N4P2 665 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 GPR26Q8NDV2 337 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 SCG3Q8WXD2 468 aaKnown RBP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 FUBP1Q96AE4 644 aaKnown RBP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 TTC1Q99614 292 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 CASS4Q9NQ75 786 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 GPR27Q9NS67 375 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 EVA1BQ9NVM1 165 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 PIH1D1Q9NWS0 290 aaKnown RBP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 SPASTQ9UBP0 616 aa14.02□□□□□ -0.17
SSBP3-208ENST00000444533 APOBEC3BQ9UH17 382 aaKnown RBP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 UTP11Q9Y3A2 253 aaKnown RBP14.02□□□□□ -0.17
SSBP3-208ENST00000444533 K7ESM1 405 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 CDX4O14627 284 aaPredicted RBP14.01□□□□□ -0.17
SSBP3-208ENST00000444533 FANCGO15287 622 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 BUD23O43709 281 aaKnown RBP14.01□□□□□ -0.17
SSBP3-208ENST00000444533 PCDHGA12O60330 932 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 CSF2P04141 144 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 NME1P15531 152 aaKnown RBP14.01□□□□□ -0.17
SSBP3-208ENST00000444533 ITGALP20701 1170 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 GRK6P43250 576 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 IL9RQ01113 521 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 BNC1Q01954 994 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 GTF2H3Q13889 308 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 ELOCQ15369 112 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 PCID2Q5JVF3 399 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 ARMC3Q5W041 872 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 DOK6Q6PKX4 331 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 FAM151BQ6UXP7 276 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 RFLNAQ6ZTI6 216 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 PHACTR4Q8IZ21 702 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 MCUQ8NE86 351 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 OR2I1PQ8NGU4 316 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 DTX3LQ8TDB6 740 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 SETD7Q8WTS6 366 aaKnown RBP14.01□□□□□ -0.17
SSBP3-208ENST00000444533 PTCD2Q8WV60 388 aaKnown RBP14.01□□□□□ -0.17
SSBP3-208ENST00000444533 ULK4Q96C45 1275 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 RANBP9Q96S59 729 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 FRMD8Q9BZ67 464 aaPredicted RBP14.01□□□□□ -0.17
SSBP3-208ENST00000444533 RAB17Q9H0T7 212 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 RXFP3Q9NSD7 469 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 CACNA1EQ15878 2313 aa14.01□□□□□ -0.17
SSBP3-208ENST00000444533 DOCK9Q9BZ29 2069 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 USP34Q70CQ2 3546 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 PRSS38A1L453 326 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 MAGEB16A2A368 324 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CTAGE15A4D2H0 777 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 EFCAB8A8MWE9 144 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 GPR89AB7ZAQ6 455 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 DNALI1O14645 258 aaPredicted RBP14□□□□□ -0.17
SSBP3-208ENST00000444533 TTI1O43156 1089 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 PRAMEF1O95521 474 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 GPR89BP0CG08 455 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CTAGE8P0CG41 777 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 RALBP11234 206 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 MLNP12872 115 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 PAMP19021 973 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 EPHA8P29322 1005 aaPredicted RBP14□□□□□ -0.17
SSBP3-208ENST00000444533 PPARGP37231 505 aaPredicted RBP14□□□□□ -0.17
SSBP3-208ENST00000444533 MAGEA6P43360 314 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 HK3P52790 923 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 PRAMEP78395 509 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 TMPRSS15P98073 1019 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 C2orf54Q08AI8 447 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CALCOCO2Q13137 446 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 KCNJ11Q14654 390 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 ZNF542PQ5EBM4 170 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 DNAJC21Q5F1R6 531 aaKnown RBP14□□□□□ -0.17
SSBP3-208ENST00000444533 LDLRAP1Q5SW96 308 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 PRAMEF14Q5SWL7 426 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CERCAMQ5T4B2 595 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 IZUMO3Q5VZ72 239 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CTAGE6Q86UF2 777 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 HOOK3Q86VS8 718 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 CTAGE4Q8IX94 777 aa14□□□□□ -0.17
SSBP3-208ENST00000444533 SDR16C5Q8N3Y7 309 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms