RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 KCTD5Q9NXV2 234 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 KLHL8Q9P2G9 620 aaPredicted RBP13.97□□□□□ -0.17
TREX1-202ENST00000444177 RABGEF1Q9UJ41 708 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 MOSPD1Q9UJG1 213 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 AMFRQ9UKV5 643 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 PACSIN2Q9UNF0 486 aaPredicted RBP13.97□□□□□ -0.17
TREX1-202ENST00000444177 RPL26L1Q9UNX3 145 aaKnown RBP13.97□□□□□ -0.17
TREX1-202ENST00000444177 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 LRP4O75096 1905 aa13.97□□□□□ -0.17
TREX1-202ENST00000444177 C1orf232A0A0U1RR37 186 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 F5H423 210 aaPredicted RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 H7C0C1 242 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 NTN3O00634 580 aaPredicted RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 TNFRSF10CO14798 259 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 MTSS1O43312 755 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 KRT86O43790 486 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 PRLP01236 227 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 SLC4A1P02730 911 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 PTMAP06454 111 aaKnown RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 MYCLP1P12525 358 aaPredicted RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 RBMS1P29558 406 aaKnown RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 CETN2P41208 172 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 ATP5OP48047 213 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 SPIDRQ14159 915 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 NOMO1Q15155 1222 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 TEX44Q53QW1 395 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 AADACL2Q6P093 401 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 OGFOD3Q6PK18 319 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 IGF2-ASQ6U949 168 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 RFLNAQ6ZTI6 216 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 UBL4BQ8N7F7 174 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 SPATA22Q8NHS9 363 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 ALG3Q92685 438 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 CCDC74AQ96AQ1 378 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 AP2M1Q96CW1 435 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 PRR11Q96HE9 360 aaPredicted RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 TEKT5Q96M29 485 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 FCRL3Q96P31 734 aaPredicted RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 HERPUD2Q9BSE4 406 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 MLPHQ9BV36 600 aaPredicted RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 SUDS3Q9H7L9 328 aaPredicted RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 MRPL40Q9NQ50 206 aaKnown RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 PHPT1Q9NRX4 125 aaPredicted RBP13.96□□□□□ -0.17
TREX1-202ENST00000444177 THSD1Q9NS62 852 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 CAPN6Q9Y6Q1 641 aa13.96□□□□□ -0.17
TREX1-202ENST00000444177 HELZ2Q9BYK8 2649 aaKnown RBP13.95□□□□□ -0.18
TREX1-202ENST00000444177 KALRNO60229 2985 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 HACD1B0YJ81 288 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 ANKRD66B4E2M5 251 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 PDE2AO00408 941 aaPredicted RBP13.95□□□□□ -0.18
TREX1-202ENST00000444177 CLDN7O95471 211 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 MT-CYBP00156 380 aaPredicted RBP13.95□□□□□ -0.18
TREX1-202ENST00000444177 NFKB1P19838 968 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 PTPN7P35236 360 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 GPR1P46091 355 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 STC1P52823 247 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 CCL7P80098 99 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 CDK3Q00526 305 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 PTSQ03393 145 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 WASHC5Q12768 1159 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 TECPR1Q7Z6L1 1165 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 TAF8Q7Z7C8 310 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 FAM46DQ8NEK8 389 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 GPR156Q8NFN8 814 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 OR6C4Q8NGE1 309 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 WDR36Q8NI36 951 aaKnown RBP13.95□□□□□ -0.18
TREX1-202ENST00000444177 HTR3CQ8WXA8 447 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 UBL7Q96S82 380 aaPredicted RBP13.95□□□□□ -0.18
TREX1-202ENST00000444177 LYSMD1Q96S90 227 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 TMEM168Q9H0V1 697 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 ABCG8Q9H221 673 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 SYNDIG1Q9H7V2 258 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 CYP4F12Q9HCS2 524 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 UBP1Q9NZI7 540 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 PCDHGA8Q9Y5G5 932 aa13.95□□□□□ -0.18
TREX1-202ENST00000444177 ARHGEF17Q96PE2 2063 aaPredicted RBP13.95□□□□□ -0.18
TREX1-202ENST00000444177 PRSS38A1L453 326 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 PMS2P1A4D2B8 440 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 EIF4E1BA6NMX2 242 aaKnown RBP13.94□□□□□ -0.18
TREX1-202ENST00000444177 MIF4GDA9UHW6 222 aaKnown RBP13.94□□□□□ -0.18
TREX1-202ENST00000444177 PMPCBO75439 489 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 PIRTP0C851 137 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 PYGMP11217 842 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 RBL1P28749 1068 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 CD68P34810 354 aaPredicted RBP13.94□□□□□ -0.18
TREX1-202ENST00000444177 TNNT3P45378 269 aaPredicted RBP13.94□□□□□ -0.18
TREX1-202ENST00000444177 PDX1P52945 283 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 OTUD4Q01804 1114 aaKnown RBP13.94□□□□□ -0.18
TREX1-202ENST00000444177 CDK18Q07002 472 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 XRCC4Q13426 336 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 SLC14A2Q15849 920 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 FOXR1Q6PIV2 292 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 DOK6Q6PKX4 331 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 PID1Q7Z2X4 250 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 GPR155Q7Z3F1 870 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 CDKL3Q8IVW4 592 aaPredicted RBP13.94□□□□□ -0.18
TREX1-202ENST00000444177 COL27A1Q8IZC6 1860 aaPredicted RBP13.94□□□□□ -0.18
TREX1-202ENST00000444177 ZNF567Q8N184 647 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 CCL4L1Q8NHW4 92 aa13.94□□□□□ -0.18
TREX1-202ENST00000444177 ACTL9Q8TC94 416 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms