RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 WASH3PC4AMC7 463 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 E5RI56 91 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 PRMT5O14744 637 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ZNF821O75541 412 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 PRAMEF1O95521 474 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 POP4O95707 220 aaKnown RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ADH1CP00326 375 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ASLP04424 464 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 EZRP15311 586 aaKnown RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ZNF7P17097 686 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 CTPS1P17812 591 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 FMO4P31512 558 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 RECQLP46063 649 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 CCNHP51946 323 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 PGGT1BP53609 377 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ERVK-21P61565 698 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 HERVK_113P63132 956 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 XIAPP98170 497 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ECT2LQ008S8 904 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 GPM6BQ13491 265 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 CAMK1Q14012 370 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 PTPRNQ16849 979 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 MYLK3Q32MK0 819 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 GPR33Q49SQ1 333 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 CARD16Q5EG05 197 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 SH2D4BQ5SQS7 431 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 SNX20Q7Z614 316 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 GRASPQ7Z6J2 395 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 RBFAQ8N0V3 343 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 SPATA6LQ8N4H0 392 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 TEX9Q8N6V9 391 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 RIN3Q8TB24 985 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 SMG7Q92540 1137 aaKnown RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 KIAA1191Q96A73 305 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 MCUR1Q96AQ8 359 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ZNF707Q96C28 371 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 SGF29Q96ES7 293 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 PRR11Q96HE9 360 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 MCCC1Q96RQ3 725 aaPredicted RBP13.11□□□□□ -0.31
CPSF4-206ENST00000441580 BTBD10Q9BSF8 475 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 TBC1D10AQ9BXI6 508 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ERVK-6Q9BXR3 956 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 TNKS2Q9H2K2 1166 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 PIDD1Q9HB75 910 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 DZANK1Q9NVP4 752 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ARMCX1Q9P291 453 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 HCFC2Q9Y5Z7 792 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 NOTCH4Q99466 2003 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 ATG2AQ2TAZ0 1938 aa13.11□□□□□ -0.31
CPSF4-206ENST00000441580 CEP350Q5VT06 3117 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 TRBV5-4A0A0C4DH59 114 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 GLYATL1P3A0A0U1RQE8 302 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 GYG2O15488 501 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 HOXC11O43248 304 aaPredicted RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ZBTB14O43829 449 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ATP6V1G2O95670 118 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ENO1P06733 434 aaKnown RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 CA3P07451 260 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ALPIP09923 528 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 POLR2EP19388 210 aaKnown RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 IMPDH1P20839 514 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 SP100P23497 879 aaPredicted RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ADSLP30566 484 aaPredicted RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 CTSOP43234 321 aaPredicted RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 STK19P49842 368 aaPredicted RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 TIAL1Q01085 375 aaKnown RBP eCLIP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ZRSR2Q15696 482 aaKnown RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 DGKKQ5KSL6 1271 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 CTSL3PQ5NE16 218 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 LY6G5CQ5SRR4 150 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 TMEM207Q6UWW9 146 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 TPRG1Q6ZUI0 275 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 TAS2R42Q7RTR8 314 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 KIAA0907Q7Z7F0 614 aaPredicted RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ISCA2Q86U28 154 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 TMEM25Q86YD3 366 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 PIANPQ8IYJ0 282 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 LSMEM2Q8N112 164 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 STAG3L4Q8TBR4 150 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 PTERQ96BW5 349 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ULK4Q96C45 1275 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 CMTM5Q96DZ9 223 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 BIRC8Q96P09 236 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ATOH8Q96SQ7 321 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 GPR21Q99679 349 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 UNKQ9C0B0 810 aaKnown RBP13.1□□□□□ -0.31
CPSF4-206ENST00000441580 CLPBQ9H078 707 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 P2RY12Q9H244 342 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 ZDHHC6Q9H6R6 413 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 CYP4F12Q9HCS2 524 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 BPIFA1Q9NP55 256 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 GTSE1Q9NYZ3 720 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 STK38LQ9Y2H1 464 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 PPIL1Q9Y3C6 166 aa13.1□□□□□ -0.31
CPSF4-206ENST00000441580 TSPAN11A1L157 253 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 PRR5-ARHGAP8B1AHC4 643 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 STX16-NPEPL1H3BU86 382 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 STX16O14662 325 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 ARHGEF15O94989 841 aa13.09□□□□□ -0.31
CPSF4-206ENST00000441580 PRSS56P0CW18 603 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms