RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 RMND5AQ9H871 391 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 CDHR5Q9HBB8 845 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 AKIP1Q9NQ31 210 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 RASSF1Q9NS23 344 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 CUEDC1Q9NWM3 386 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-214ENST00000441542 CD300AQ9UGN4 299 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 MID2Q9UJV3 735 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 GINS2Q9Y248 185 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 B3GNT3Q9Y2A9 372 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 NDUFAF1Q9Y375 327 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 UBIAD1Q9Y5Z9 338 aa7.52□□□□□ -1.21
HDAC9-214ENST00000441542 DNMT3AQ9Y6K1 912 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-214ENST00000441542 A0A087WZ62 844 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 FAM95CA0A1B0GW59 222 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 C16orf96A6NNT2 1141 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 SIX3O95343 332 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 TRIM16O95361 564 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 GFAPP14136 432 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 GPD2P43304 727 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 SERPINB10P48595 397 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 POLD2P49005 469 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 CD47Q08722 323 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 TRAP1Q12931 704 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 TAB1Q15750 504 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 HSDL1Q3SXM5 330 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 SOWAHCQ53LP3 525 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 SLC16A12Q6ZSM3 486 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 FKBP9P1Q75LS8 142 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 GALNT13Q8IUC8 556 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 FUNDC1Q8IVP5 155 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 CENPLQ8N0S6 344 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 AFAP1L2Q8N4X5 818 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 BEND7Q8N7W2 519 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 IPMKQ8NFU5 416 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 MCOLN3Q8TDD5 553 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 PROX1Q92786 737 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 NELL1Q92832 810 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 PRMT6Q96LA8 375 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ZNF560Q96MR9 790 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 IER2Q9BTL4 223 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 TDRD1Q9BXT4 1180 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ROGDIQ9GZN7 287 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ZNF385DQ9H6B1 395 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ALG9Q9H6U8 611 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 RPRD1BQ9NQG5 326 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 UCKL1Q9NWZ5 548 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 TMEM181Q9P2C4 612 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 SNX6Q9UNH7 406 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ADGRA2Q96PE1 1338 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 KRT87PA6NCN2 255 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 PPEF1O14829 653 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 DYRK3O43781 588 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 CPNE3O75131 537 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ALDH1A2O94788 518 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 TOMM70O94826 608 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 AHSGP02765 367 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 SLC35E2BP0CK96 405 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 STMN1P16949 149 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 RFC2P35250 354 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 LEPRP48357 1165 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 DIO3P55073 304 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 GP2P55259 537 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 MTPNP58546 118 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 SNRPD2P62316 118 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 CYP4F2P78329 520 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 NRG1Q02297 640 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 CYP4F3Q08477 520 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ILF2Q12905 390 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 PCSK7Q16549 785 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 DPY19L1Q2PZI1 675 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 CTU2Q2VPK5 515 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 NOL9Q5SY16 702 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 TSTD2Q5T7W7 516 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 INTS11Q5TA45 600 aaKnown RBP7.51□□□□□ -1.21
HDAC9-214ENST00000441542 NCBP2-AS2Q69YL0 99 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 NPAS4Q8IUM7 802 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 FAM20CQ8IXL6 584 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 LEMD2Q8NC56 503 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ZNF555Q8NEP9 628 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 TRAPPC12Q8WVT3 735 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ZHX1-C8orf76Q96EF9 292 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 PDCD2LQ9BRP1 358 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 ASPSCR1Q9BZE9 553 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 MAP10Q9P2G4 905 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 SLC2A6Q9UGQ3 507 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 UTS2RQ9UKP6 389 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 SNX10Q9Y5X0 201 aa7.51□□□□□ -1.21
HDAC9-214ENST00000441542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CCDC162PA2VCL2 907 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NCF1BA6NI72 391 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 GOLGA8CPA6NN73 597 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CENPXA8MT69 81 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NCF1CA8MVU1 366 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ZBTB24O43167 697 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 JCHAINP01591 159 aa7.5□□□□□ -1.21
HDAC9-214ENST00000441542 ALDOCP09972 364 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 NCF1P14598 390 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 BTF3P20290 206 aaKnown RBP7.5□□□□□ -1.21
HDAC9-214ENST00000441542 CRHBPP24387 322 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms