RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 SUDS3Q9H7L9 328 aaPredicted RBP8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 CYP4F11Q9HBI6 524 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 LHX3Q9UBR4 397 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 CRYL1Q9Y2S2 319 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 NDUFAF1Q9Y375 327 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 PCDHB1Q9Y5F3 818 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 PRSS51A0A1B0GVH4 220 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 TTC24A2A3L6 582 aaPredicted RBP8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 TMEM233B4DJY2 109 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 EFCAB14O75071 495 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 VPS26AO75436 327 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 SUPT7LO94864 414 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 MLYCDO95822 493 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 GPX3P22352 226 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 SCNN1BP51168 640 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 THOP1P52888 689 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 PSME3P61289 254 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 CEACAM7Q14002 265 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 IKBKEQ14164 716 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 FASTKQ14296 549 aaKnown RBP8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 LYPLAL1Q5VWZ2 237 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 RNF219Q5W0B1 726 aaPredicted RBP8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 ANKS6Q68DC2 871 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 IZUMO2Q6UXV1 221 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 RNF135Q8IUD6 432 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 CMTR2Q8IYT2 770 aaKnown RBP8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 PTGR2Q8N8N7 351 aaPredicted RBP8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 AGR3Q8TD06 166 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 MOCOSQ96EN8 888 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 HOPXQ9BPY8 73 aaPredicted RBP8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 SPON2Q9BUD6 331 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 P2RY12Q9H244 342 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 CYP4F12Q9HCS2 524 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 TNFRSF12AQ9NP84 129 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 CACNA2D2Q9NY47 1150 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 TMEM181Q9P2C4 612 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 KLHL42Q9P2K6 505 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 HCSTQ9UBK5 93 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 CD300AQ9UGN4 299 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 SCOCQ9UIL1 159 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 ADAMTS6Q9UKP5 1117 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 PCDHGA7Q9Y5G6 932 aa8.17□□□□□ -1.1
SPIRE1-204ENST00000440472 SCN5AQ14524 2016 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 ABHD14A-ACY1A0A1B0GW23 586 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 TYW5A2RUC4 315 aaKnown RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 DENRO43583 198 aaKnown RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 NRP2O60462 931 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 SRP72O76094 671 aaKnown RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 TMCC1O94876 653 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 BAG2O95816 211 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 TSPAN12O95859 305 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 UQCRBP14927 111 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 RAG1P15918 1043 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 LAG3P18627 525 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 HSPA13P48723 471 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 LBX1P52954 281 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 PLK1P53350 603 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 EPHB3P54753 998 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 STX1BP61266 288 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 SH3BP2P78314 561 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 CACNG1Q06432 222 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 ADGRE1Q14246 886 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 FLOT2Q14254 428 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 TRIM25Q14258 630 aaKnown RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 SAMD4BQ5PRF9 694 aaKnown RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 TRIM68Q6AZZ1 485 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 REP15Q6BDI9 236 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 CAPRIN2Q6IMN6 1127 aaKnown RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 KIAA1841Q6NSI8 718 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 TMEM150AQ86TG1 271 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 LDB1Q86U70 411 aaPredicted RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 PIM3Q86V86 326 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 GALNT13Q8IUC8 556 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 CBARPQ8N350 705 aaPredicted RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 FBXO39Q8N4B4 442 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 PCYOX1LQ8NBM8 494 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 GDPD5Q8WTR4 605 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 PYDC1Q8WXC3 89 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 ACDQ96AP0 544 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 RMDN1Q96DB5 314 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 PHF21BQ96EK2 531 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 ZNF558Q96NG5 402 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 UHRF1Q96T88 793 aaPredicted RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 GPATCH1Q9BRR8 931 aaKnown RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 FEM1AQ9BSK4 669 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 SHCBP1LQ9BZQ2 653 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 RNF38Q9H0F5 515 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 ZNF106Q9H2Y7 1883 aaKnown RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 IL17CQ9P0M4 197 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 EPS15L1Q9UBC2 864 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 ZNF711Q9Y462 761 aa8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 MTF2Q9Y483 593 aaPredicted RBP8.16□□□□□ -1.1
SPIRE1-204ENST00000440472 DYTNA2CJ06 578 aa8.15□□□□□ -1.1
SPIRE1-204ENST00000440472 H3BMM5 538 aa8.15□□□□□ -1.1
SPIRE1-204ENST00000440472 CCL22O00626 93 aa8.15□□□□□ -1.1
SPIRE1-204ENST00000440472 FBP2O00757 339 aa8.15□□□□□ -1.1
SPIRE1-204ENST00000440472 STX7O15400 261 aaKnown RBP8.15□□□□□ -1.1
SPIRE1-204ENST00000440472 HTRA2O43464 458 aaPredicted RBP8.15□□□□□ -1.1
SPIRE1-204ENST00000440472 LILRB3O75022 631 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms