RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 E2F1Q01094 437 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 NR0B2Q15466 257 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 SIRPB2Q5JXA9 342 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 HENMT1Q5T8I9 393 aaKnown RBP23.52■■□□□ 1.36
VARS-217ENST00000440048 ITPRIPL1Q6GPH6 555 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 DOK6Q6PKX4 331 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 TRIM74Q86UV6 250 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 SLC25A41Q8N5S1 370 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 IPMKQ8NFU5 416 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 IFI44Q8TCB0 444 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 PTCD2Q8WV60 388 aaKnown RBP23.52■■□□□ 1.36
VARS-217ENST00000440048 GLMNQ92990 594 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 HIC2Q96JB3 615 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 SRPK1Q96SB4 655 aaKnown RBP23.52■■□□□ 1.36
VARS-217ENST00000440048 GORASP1Q9BQQ3 440 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 GPR63Q9BZJ6 419 aa23.52■■□□□ 1.36
VARS-217ENST00000440048 SUDS3Q9H7L9 328 aaPredicted RBP23.52■■□□□ 1.36
VARS-217ENST00000440048 CARS2Q9HA77 564 aaKnown RBP23.52■■□□□ 1.36
VARS-217ENST00000440048 R3HDM2Q9Y2K5 976 aaKnown RBP23.52■■□□□ 1.36
VARS-217ENST00000440048 SCN8AQ9UQD0 1980 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 CPED1A4D0V7 1026 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 INPP4BO15327 924 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 SLC4A1P02730 911 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 CHRNA4P43681 627 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 TNNT3P45378 269 aaPredicted RBP23.51■■□□□ 1.35
VARS-217ENST00000440048 INSM1Q01101 510 aaPredicted RBP23.51■■□□□ 1.35
VARS-217ENST00000440048 HES3Q5TGS1 186 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 MEI1Q5TIA1 1274 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 GUSBP11Q6P575 273 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 TAF8Q7Z7C8 310 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 CCL4L1Q8NHW4 92 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 CCDC110Q8TBZ0 833 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 COX14Q96I36 57 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 SPATA13Q96N96 652 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 CNOT6Q9ULM6 557 aaKnown RBP23.51■■□□□ 1.35
VARS-217ENST00000440048 SUFUQ9UMX1 484 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 GPR34Q9UPC5 381 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 TMEM98Q9Y2Y6 226 aa23.51■■□□□ 1.35
VARS-217ENST00000440048 EME2A4GXA9 379 aaPredicted RBP23.5■■□□□ 1.35
VARS-217ENST00000440048 FADS2P1A8MWK0 482 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 AURKAO14965 403 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 ANXA9O76027 345 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 GP1BAP07359 652 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 IVLP07476 585 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 PSMB4P28070 264 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 GNPDA1P46926 289 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 RPIAP49247 311 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 GEMP55040 296 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 SLC1A5Q15758 541 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 SEL1L2Q5TEA6 688 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 EFL1Q7Z2Z2 1120 aaKnown RBP23.5■■□□□ 1.35
VARS-217ENST00000440048 GPR26Q8NDV2 337 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 SCARF2Q96GP6 870 aaPredicted RBP23.5■■□□□ 1.35
VARS-217ENST00000440048 SIRPGQ9P1W8 387 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 GULP1Q9UBP9 304 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 PPP2R2CQ9Y2T4 447 aa23.5■■□□□ 1.35
VARS-217ENST00000440048 DSPP15924 2871 aaKnown RBP23.49■■□□□ 1.35
VARS-217ENST00000440048 ZNF189O75820 626 aaPredicted RBP23.49■■□□□ 1.35
VARS-217ENST00000440048 JUPP14923 745 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 HLA-DPA1P20036 260 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 DCDC1P59894 354 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 RPS6KA1Q15418 735 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 ALS2CLQ60I27 953 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 ARL10Q8N8L6 244 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 KYQ8NBH2 561 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 SLC35B2Q8TB61 432 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 ALS2CR12Q96Q35 445 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 FSD1LQ9BXM9 530 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 RAD18Q9NS91 495 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 NFKBIL1Q9UBC1 381 aaPredicted RBP23.49■■□□□ 1.35
VARS-217ENST00000440048 PADI4Q9UM07 663 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 FREM2Q5SZK8 3169 aa23.49■■□□□ 1.35
VARS-217ENST00000440048 WDFY3Q8IZQ1 3526 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 PKD1L2Q7Z442 2459 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 C5orf60A6NFR6 353 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 OPA1O60313 960 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 AGTP01019 485 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 TTC30BQ8N4P2 665 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 FAM71DQ8N9W8 422 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 FAM46DQ8NEK8 389 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 GPBAR1Q8TDU6 330 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 FICDQ9BVA6 458 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 SPATA16Q9BXB7 569 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 CDH19Q9H159 772 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 TRABDQ9H4I3 376 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 TRNAU1APQ9NX07 287 aaKnown RBP23.48■■□□□ 1.35
VARS-217ENST00000440048 ZMIZ1Q9ULJ6 1067 aa23.48■■□□□ 1.35
VARS-217ENST00000440048 OAS3Q9Y6K5 1087 aaKnown RBP23.48■■□□□ 1.35
VARS-217ENST00000440048 FAM208BQ5VWN6 2430 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 ASMTLO95671 621 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 FGF1P05230 155 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 BPIP17213 487 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 ADCY8P40145 1251 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 CAMK2BQ13554 666 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 PRPSAP1Q14558 356 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 PERM1Q5SV97 790 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 MARK2Q7KZI7 788 aaKnown RBP23.47■■□□□ 1.35
VARS-217ENST00000440048 NRROSQ86YC3 692 aa23.47■■□□□ 1.35
VARS-217ENST00000440048 SLC13A5Q86YT5 568 aaPredicted RBP23.47■■□□□ 1.35
VARS-217ENST00000440048 ZCCHC14Q8WYQ9 949 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms