RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 KCNC1P48547 511 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 MNAT1P51948 309 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 HERVK_113P63132 956 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 SATB1Q01826 763 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 KDSRQ06136 332 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 SULT2A1Q06520 285 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 CDKN3Q16667 212 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 CTSL3PQ5NE16 218 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 ZNF678Q5SXM1 525 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 PDE12Q6L8Q7 609 aaKnown RBP11.72□□□□□ -0.53
SMAD3-202ENST00000439724 PAQR3Q6TCH7 311 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 CERS6Q6ZMG9 384 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 TMEM25Q86YD3 366 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 ARHGAP24Q8N264 748 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 AFAP1L2Q8N4X5 818 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 NKAPQ8N5F7 415 aaKnown RBP11.72□□□□□ -0.53
SMAD3-202ENST00000439724 PCDH20Q8N6Y1 951 aaKnown RBP11.72□□□□□ -0.53
SMAD3-202ENST00000439724 RBM15BQ8NDT2 890 aaKnown RBP11.72□□□□□ -0.53
SMAD3-202ENST00000439724 GRIN3AQ8TCU5 1115 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 KCNJ9Q92806 393 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 IRF7Q92985 503 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 KIAA1191Q96A73 305 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 MCUR1Q96AQ8 359 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 VOPP1Q96AW1 172 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 ECHDC3Q96DC8 303 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 OR52B2Q96RD2 323 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 GPR21Q99679 349 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 ERVK-6Q9BXR3 956 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 P2RY12Q9H244 342 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 TNKS2Q9H2K2 1166 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 ZFYVE1Q9HBF4 777 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 ZDHHC7Q9NXF8 308 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 SLC25A13Q9UJS0 675 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 CDYLQ9Y232 598 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 SLC30A1Q9Y6M5 507 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 NUP210Q8TEM1 1887 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-202ENST00000439724 E9PBE3 544 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 H3BMM5 538 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 KLHL41O60662 606 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 KERAO60938 352 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 MTHFD2P13995 350 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 NCF2P19878 526 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 RPS3P23396 243 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 CCND1P24385 295 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 ADSLP30566 484 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 STK19P49842 368 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 KLF10Q13118 480 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 NAA25Q14CX7 972 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 OR4D1Q15615 310 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 MYLK3Q32MK0 819 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 LSM12Q3MHD2 195 aaKnown RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 UNC50Q53HI1 259 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 SH2D4BQ5SQS7 431 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 ASTLQ6HA08 431 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 ELMSAN1Q6PJG2 1045 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 CBARPQ8N350 705 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 CPSF7Q8N684 471 aaKnown RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 STAG3L4Q8TBR4 150 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 MAELQ96JY0 434 aaKnown RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 ASB2Q96Q27 587 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 BBS2Q9BXC9 721 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 CPEB1Q9BZB8 566 aaKnown RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 NUF2Q9BZD4 464 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 ZNF385DQ9H6B1 395 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 WDR55Q9H6Y2 383 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-202ENST00000439724 SPHK2Q9NRA0 654 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 GTSE1Q9NYZ3 720 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 MARK1Q9P0L2 795 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 PLA2G4CQ9UP65 541 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 FAM50BQ9Y247 325 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 PPIL1Q9Y3C6 166 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 PCDHB1Q9Y5F3 818 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 MYOFQ9NZM1 2061 aa11.71□□□□□ -0.53
SMAD3-202ENST00000439724 TRBV5-4A0A0C4DH59 114 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 A0A0U1RQS6 177 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 C1orf232A0A0U1RR37 186 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 NEDD8-MDP1E9PL57 170 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 GAPDHSO14556 408 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 ZNF197O14709 1029 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PRMT5O14744 637 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 OR1I1O60431 355 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 NIPSNAP2O75323 286 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 ARHGEF15O94989 841 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 HNRNPLP14866 589 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 ITGALP20701 1170 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 GKP32189 559 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 HNF1BP35680 557 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PGM1P36871 562 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PPARGP37231 505 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-202ENST00000439724 RAP1GDS1P52306 607 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 COPAP53621 1224 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 PTPN5P54829 565 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 INHBCP55103 352 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 NAA20P61599 178 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 NTHL1P78549 312 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 UGT3A1Q6NUS8 523 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 TAS2R42Q7RTR8 314 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SNX20Q7Z614 316 aa11.7□□□□□ -0.54
SMAD3-202ENST00000439724 SPRED2Q7Z698 418 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms