RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 ARSEP51690 589 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 ZNF135P52742 658 aaPredicted RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 MAZP56270 477 aaKnown RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 TAS2R40P59535 323 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 ERVPABLB-1P60509 514 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 ITKQ08881 620 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 DPYSL3Q14195 570 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 MARC1Q5VT66 337 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 NCBP2-AS2Q69YL0 99 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 DOK6Q6PKX4 331 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 LVRNQ6Q4G3 990 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 Q6ZVL8 140 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 GPR155Q7Z3F1 870 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 TMPRSS9Q7Z410 1059 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 HEATR4Q86WZ0 1026 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 NRROSQ86YC3 692 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 LSMEM2Q8N112 164 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 CBARPQ8N350 705 aaPredicted RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 ZNF564Q8TBZ8 553 aaPredicted RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 TEKT4Q8WW24 435 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 KCNE4Q8WWG9 221 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 DTD2Q96FN9 168 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 GFM1Q96RP9 751 aaKnown RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 UBL7Q96S82 380 aaPredicted RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 SEMA3CQ99985 751 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 DPEP2Q9H4A9 486 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 CARS2Q9HA77 564 aaKnown RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 EPB41L5Q9HCM4 733 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 THSD1Q9NS62 852 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 SPATS2LQ9NUQ6 558 aaKnown RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 PHTF1Q9UMS5 762 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 NENFQ9UMX5 172 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 LUC7L2Q9Y383 392 aaKnown RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 PLEKHM1Q9Y4G2 1056 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 BZW2Q9Y6E2 419 aaKnown RBP8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 RNF215Q9Y6U7 377 aa8.1□□□□□ -1.11
AC012494.1-201ENST00000439259 CCDC187A0A096LP49 1063 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 CDRT15L2A8MXV6 281 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 D6RAR5 112 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 CDK2AP1O14519 115 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 CEACAM5P06731 702 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 HOXC4P09017 264 aaPredicted RBP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 EPXP11678 715 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 MYCLP1P12525 358 aaPredicted RBP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 KRT10P13645 584 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 ITIH1P19827 911 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 HSPA9P38646 679 aaKnown RBP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 GARSP41250 739 aaKnown RBP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 GNPDA1P46926 289 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 SNRPNP63162 240 aaKnown RBP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 CDK3Q00526 305 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 DSC2Q02487 901 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 NIPAL4Q0D2K0 466 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 SRSF6Q13247 344 aaKnown RBP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 HLTFQ14527 1009 aaKnown RBP eCLIP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 C14orf28Q4W4Y0 310 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 ANKRD20A8PQ5CZ79 823 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 ARMC12Q5T9G4 340 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 SPECC1LQ69YQ0 1117 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 RAET1GQ6H3X3 334 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 OGFOD3Q6PK18 319 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 TECPR1Q7Z6L1 1165 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 TRIM74Q86UV6 250 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 CCNJLQ8IV13 435 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 HOMEZQ8IX15 550 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 TEX26Q8N6G2 289 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 SPC24Q8NBT2 197 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 KCTD6Q8NC69 237 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 ATL2Q8NHH9 583 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 WDR36Q8NI36 951 aaKnown RBP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 FAM71BQ8TC56 605 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 NSMCE1Q8WV22 266 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 PIH1D2Q8WWB5 315 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 PATE1Q8WXA2 126 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 SCAMP4Q969E2 229 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 SCRN2Q96FV2 425 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 AGAP2Q99490 1192 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 XPO4Q9C0E2 1151 aaKnown RBP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 LRRN3Q9H3W5 708 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 RRAGDQ9NQL2 400 aaPredicted RBP8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 CTTNBP2NLQ9P2B4 639 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 LRIT1Q9P2V4 623 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 SUFUQ9UMX1 484 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 TMEM98Q9Y2Y6 226 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 TTLL3Q9Y4R7 772 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 PCDHGA8Q9Y5G5 932 aa8.09□□□□□ -1.11
AC012494.1-201ENST00000439259 SHROOM3Q8TF72 1996 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 A6NJY4 79 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 GNB5O14775 395 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 TNFRSF10CO14798 259 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 PLD2O14939 933 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 MATN3O15232 486 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 ATXN7O15265 892 aaPredicted RBP8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 CBFA2T2O43439 604 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 FZD6O60353 706 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 PROSCO94903 275 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 SOD1P00441 154 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 PRLP01236 227 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 PROCP04070 461 aa8.08□□□□□ -1.12
AC012494.1-201ENST00000439259 FGF1P05230 155 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms