RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ING2Q9H160 280 aa13.52□□□□□ -0.24
PCNX3-202ENST00000439247 TUBB1Q9H4B7 451 aa13.52□□□□□ -0.24
PCNX3-202ENST00000439247 CREBZFQ9NS37 354 aa13.52□□□□□ -0.24
PCNX3-202ENST00000439247 TCRBV5S2A0A599 114 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 LRIG2O94898 1065 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 STAU1O95793 577 aaKnown RBP13.52□□□□□ -0.25
PCNX3-202ENST00000439247 TTKP33981 857 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 CDKN2DP55273 166 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 RPS3AP61247 264 aaKnown RBP13.52□□□□□ -0.25
PCNX3-202ENST00000439247 GRSF1Q12849 480 aaKnown RBP eCLIP13.52□□□□□ -0.25
PCNX3-202ENST00000439247 SEMA3BQ13214 749 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 PSMD5Q16401 504 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 UGP2Q16851 508 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 HACD2Q6Y1H2 254 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 RALGPS2Q86X27 583 aaPredicted RBP13.52□□□□□ -0.25
PCNX3-202ENST00000439247 TTC39CQ8N584 583 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 ARL10Q8N8L6 244 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 C2CD4AQ8NCU7 369 aaPredicted RBP13.52□□□□□ -0.25
PCNX3-202ENST00000439247 SLC22A17Q8WUG5 538 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 STON2Q8WXE9 905 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 HDAC11Q96DB2 347 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 SH3YL1Q96HL8 342 aaPredicted RBP13.52□□□□□ -0.25
PCNX3-202ENST00000439247 SIK2Q9H0K1 926 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 RAD21L1Q9H4I0 556 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 ALG2Q9H553 416 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 DNMT3BQ9UBC3 853 aaKnown RBP13.52□□□□□ -0.25
PCNX3-202ENST00000439247 OR12D3Q9UGF7 316 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 GPC6Q9Y625 555 aaPredicted RBP13.52□□□□□ -0.25
PCNX3-202ENST00000439247 SLC30A1Q9Y6M5 507 aa13.52□□□□□ -0.25
PCNX3-202ENST00000439247 ASPDHA6ND91 283 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 ERI2A8K979 691 aaKnown RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 KDM1AO60341 852 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 BCAS1O75363 584 aaPredicted RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 E2F6O75461 281 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 HTR1AP08908 422 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 USP17L7P0C7H9 530 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 CYP2C9P11712 490 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 FSHRP23945 695 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 EEF1DP29692 281 aaKnown RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 RPL34P49207 117 aaKnown RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 LIPEQ05469 1076 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 MAPK11Q15759 364 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 HABP4Q5JVS0 413 aaKnown RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 NEPROQ6NW34 567 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 PAQR9Q6ZVX9 377 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 ZNF467Q7Z7K2 595 aaPredicted RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 CNTN4Q8IWV2 1026 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 AFAP1L2Q8N4X5 818 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 ZFP90Q8TF47 636 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 TMEM125Q96AQ2 219 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 PTERQ96BW5 349 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 TUBGCP3Q96CW5 907 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 SNX27Q96L92 541 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 HSFY1Q96LI6 401 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 FUNDC2Q9BWH2 189 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 SMARCAD1Q9H4L7 1026 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 SIAEQ9HAT2 523 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 PLEKHA5Q9HAU0 1116 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 MID1IP1Q9NPA3 183 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 CD320Q9NPF0 282 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 TMEM30AQ9NV96 361 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 NSMCE4AQ9NXX6 385 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 POU2F3Q9UKI9 436 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 CRYL1Q9Y2S2 319 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 VWA7Q9Y334 891 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 PCDHA9Q9Y5H5 950 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 NRCAMQ92823 1304 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 A0A087X1B8 175 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 CLASP2O75122 1294 aaKnown RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 CNOT3O75175 753 aaKnown RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 JRKO75564 520 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 ALBP02768 609 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 LTA4HP09960 611 aaKnown RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 HSD17B1P14061 328 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 HGFP14210 728 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 AGXTP21549 392 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 HTR1BP28222 390 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 ACADSBP45954 432 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 MEP1AQ16819 746 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 FAM187BQ17R55 369 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 ZNF678Q5SXM1 525 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 GTF2IRD2BQ6EKJ0 949 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 BNIPLQ7Z465 357 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 GTF2IRD2Q86UP8 949 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 FAR2Q96K12 515 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 KCTD14Q9BQ13 255 aaPredicted RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 CHID1Q9BWS9 393 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 VTA1Q9NP79 307 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 INTS7Q9NVH2 962 aaKnown RBP13.51□□□□□ -0.25
PCNX3-202ENST00000439247 STAP1Q9ULZ2 295 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 TIMM22Q9Y584 194 aa13.51□□□□□ -0.25
PCNX3-202ENST00000439247 CDK14O94921 469 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 ESRRBO95718 433 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 LDLRP01130 860 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 TMBIM6P55061 237 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 NFYCQ13952 458 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 OXA1LQ15070 435 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 RPS6KA2Q15349 733 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 DPY19L1Q2PZI1 675 aa13.5□□□□□ -0.25
PCNX3-202ENST00000439247 FBXO47Q5MNV8 452 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms