RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 NR5A2O00482 541 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 PYGLP06737 847 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 IFIT1P09914 478 aaKnown RBP3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 METAP2P50579 478 aaKnown RBP eCLIP3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 LMO4P61968 165 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 IRX1P78414 480 aaPredicted RBP3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 GAGE5Q13069 117 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 GAGE6Q13070 117 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TRPC3Q13507 836 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 ZNF234Q14588 700 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TADA2BQ86TJ2 420 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TMTC1Q8IUR5 882 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SLC35F3Q8IY50 421 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SPAG16Q8N0X2 631 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SPATA6LQ8N4H0 392 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TNIP2Q8NFZ5 429 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 RUFY2Q8WXA3 655 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TM9SF4Q92544 642 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 ELP4Q96EB1 424 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SCRN2Q96FV2 425 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 BPIFA1Q9NP55 256 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 MMP25Q9NPA2 562 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 BEX4Q9NWD9 120 aaPredicted RBP3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 MAP3K20Q9NYL2 800 aaKnown RBP3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 KIAA1456Q9P272 454 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TTC7AQ9ULT0 858 aaPredicted RBP3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 RNF215Q9Y6U7 377 aa3.67□□□□□ -1.82
UPP2-IT1-201ENST00000439185 IGLV5-45A0A087WSX0 123 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 CCDC196A0A1B0GTZ2 297 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 GAGE10A6NGK3 116 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 KRTAP16-1A8MUX0 517 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TEX22C9J3V5 150 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 CAVIN2O95810 425 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 MT-CYBP00156 380 aaPredicted RBP3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 IGHV4-39P01824 125 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 DDX5P17844 614 aaKnown RBP3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 AZU1P20160 251 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SHMT1P34896 483 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 EFNA5P52803 228 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 NFIL3Q16649 462 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TCTN1Q2MV58 587 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 WDR38Q5JTN6 314 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 METTL2BQ6P1Q9 378 aaKnown RBP3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 CPLX2Q6PUV4 134 aaKnown RBP3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SH2D6Q7Z4S9 175 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 ZBTB2Q8N680 514 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TRIM58Q8NG06 486 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 NOC3LQ8WTT2 800 aaKnown RBP3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 PIGTQ969N2 578 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 HVCN1Q96D96 273 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 METTL2AQ96IZ6 378 aaKnown RBP3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 ASCL2Q99929 193 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SH3GL2Q99962 352 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 INTS2Q9H0H0 1204 aaKnown RBP3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 TFB2MQ9H5Q4 396 aaKnown RBP3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 PPP1R3EQ9H7J1 279 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SLC52A3Q9NQ40 469 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 OGFRQ9NZT2 677 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 HCN3Q9P1Z3 774 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 PDP2Q9P2J9 529 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SLC25A10Q9UBX3 287 aaPredicted RBP3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 SLC13A4Q9UKG4 626 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 FAM96BQ9Y3D0 163 aa3.66□□□□□ -1.82
UPP2-IT1-201ENST00000439185 CTAGE9A4FU28 777 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 IGLV1-44P01699 117 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 URODP06132 367 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 HEXAP06865 529 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 HNRNPA1P09651 372 aaKnown RBP eCLIP3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 CTAGE8P0CG41 777 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 PRSS56P0CW18 603 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 CDH15P55291 814 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 RPL24P83731 157 aaKnown RBP3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 CAMK1Q14012 370 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 ZNF766Q5HY98 468 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 APLFQ8IW19 511 aaPredicted RBP3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 DHX40Q8IX18 779 aaKnown RBP3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 CTAGE4Q8IX94 777 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 ZCCHC10Q8TBK6 192 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 TMEM190Q8WZ59 177 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 HTRA1Q92743 480 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 ZBTB10Q96DT7 871 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 FUZQ9BT04 418 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 UBXN6Q9BZV1 441 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 WASH6PQ9NQA3 447 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 TBX20Q9UMR3 447 aa3.65□□□□□ -1.83
UPP2-IT1-201ENST00000439185 ZNHIT1O43257 154 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 SYNGR3O43761 229 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 PRKNO60260 465 aaPredicted RBP3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 ERVK-10P10266 1014 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 XBP1P17861 261 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 POU1F1P28069 291 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 CLK1P49759 484 aaKnown RBP3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 DSCR10P59022 87 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 EFNB1P98172 346 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 GRIK2Q13002 908 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 TDGQ13569 410 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 GPR68Q15743 365 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 BAK1Q16611 211 aa3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 HIST2H2ACQ16777 129 aaPredicted RBP3.64□□□□□ -1.83
UPP2-IT1-201ENST00000439185 TMEM35AQ53FP2 167 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms