RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SIGLEC1Q9BZZ2 1709 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 MATN3O15232 486 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 CYBAP13498 195 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 KCNJ5P48544 419 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 KCNQ1P51787 676 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 PRMT9Q6P2P2 845 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 ADAMTS15Q8TE58 950 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 TRAFD1O14545 582 aaPredicted RBP12.05□□□□□ -0.48
NEK1-201ENST00000439128 CSNK2BP67870 215 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 SEMA5AQ13591 1074 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 BEND5Q7L4P6 421 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 PNO1Q9NRX1 252 aaKnown RBP12.05□□□□□ -0.48
NEK1-201ENST00000439128 CCL22O00626 93 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 AP3D1O14617 1153 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 PLGP00747 810 aaPredicted RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 RB1P06400 928 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 SYPP08247 313 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 GPD2P43304 727 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 ASPAP45381 313 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 RPL14P50914 215 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 LDB1Q86U70 411 aaPredicted RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 SLC9A6Q92581 669 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 RIOK2Q9BVS4 552 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 SUSD2Q9UGT4 822 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 CAB39Q9Y376 341 aaPredicted RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 A6NCN8 305 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 ZNF865P0CJ78 1059 aaPredicted RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 HSMCR30P0CW71 290 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 SEC24CP53992 1094 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 STXBP1P61764 594 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 SERINC5Q86VE9 423 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 IL22RA1Q8N6P7 574 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 SPATA22Q8NHS9 363 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 C7orf43Q8WVR3 580 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 RAD51AP1Q96B01 352 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 NDC1Q9BTX1 674 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 OSBPL1AQ9BXW6 950 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 ST6GALNAC4Q9H4F1 302 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 TAGLN3Q9UI15 199 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 DMTF1Q9Y222 760 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 PCDHGB3Q9Y5G1 929 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 TMEM150CB9EJG8 249 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 PPEF2O14830 753 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 EPHB6O15197 1021 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 B3GALT2O43825 422 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 ATG7O95352 703 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 APOA1P02647 267 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 MMP8P22894 467 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 RBMS1P29558 406 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 PON2Q15165 354 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 PLEKHG6Q3KR16 790 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 TCEAL5Q5H9L2 206 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 TBCELQ5QJ74 424 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 CERS6Q6ZMG9 384 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 LIX1Q8N485 282 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 ANKLE1Q8NAG6 615 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 MOSPD2Q8NHP6 518 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 RNASE11Q8TAA1 199 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 HLA-CQ95604 372 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 MRPL57Q9BQC6 102 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 SLC25A51Q9H1U9 297 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 EXD2Q9NVH0 621 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 FKBPLQ9UIM3 349 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 PCDHGC3Q9UN70 934 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 GRIN2DO15399 1336 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 MARCKSL1P49006 195 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 TAF5Q15542 800 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 PUS10Q3MIT2 529 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 TNFRSF25Q93038 417 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 TBATAQ96M53 351 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 PCDHB18PQ96TA0 734 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 ADAM7Q9H2U9 754 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 FAM124BQ9H5Z6 455 aaPredicted RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 KLHL1Q9NR64 748 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 SPATS2LQ9NUQ6 558 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 SAGE1Q9NXZ1 904 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 CDC14AQ9UNH5 594 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 PIAS3Q9Y6X2 628 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 A8MUA0 341 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 PIM1P11309 404 aaPredicted RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 TM4SF4P48230 202 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 NAGLUP54802 743 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 LAPTM5Q13571 262 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 TTC33Q6PID6 262 aaPredicted RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 KYAT3Q6YP21 454 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 MTDHQ86UE4 582 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 TFAP2BQ92481 460 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 MARK4Q96L34 752 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 ELL3Q9HB65 397 aaPredicted RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 NEK6Q9HC98 313 aa12.04□□□□□ -0.48
NEK1-201ENST00000439128 DMGDHQ9UI17 866 aaKnown RBP12.04□□□□□ -0.48
NEK1-201ENST00000439128 RFPL2O75678 378 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 LINC00032P0C843 101 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 NDUFS1P28331 727 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 CCKBRP32239 447 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 SLC9B2Q86UD5 537 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 PARP9Q8IXQ6 854 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms