RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 CLDN7O95471 211 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 PRLP01236 227 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 STC1P52823 247 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 LIMK2P53671 638 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 PAFAH1B3Q15102 231 aaKnown RBP18.06■□□□□ 0.48
GTF3A-204ENST00000438571 PYCR3Q53H96 274 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 ARRDC2Q8TBH0 407 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 SLC37A2Q8TED4 501 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 COX14Q96I36 57 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 RIOK2Q9BVS4 552 aaKnown RBP18.06■□□□□ 0.48
GTF3A-204ENST00000438571 CDH19Q9H159 772 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 NENFQ9UMX5 172 aa18.06■□□□□ 0.48
GTF3A-204ENST00000438571 A0A1W2PQJ5 194 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 ATP1A1P05023 1023 aaKnown RBP18.05■□□□□ 0.48
GTF3A-204ENST00000438571 SERPING1P05155 500 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 FAM87AP0C7U9 286 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 THRAP10827 490 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 NFKBIAP25963 317 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 GBE1Q04446 702 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 BIRC2Q13490 618 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 ALG1LQ6GMV1 187 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 LPCAT1Q8NF37 534 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 ZNF564Q8TBZ8 553 aaPredicted RBP18.05■□□□□ 0.48
GTF3A-204ENST00000438571 TRIM4Q9C037 500 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 RBM22Q9NW64 420 aaKnown RBP eCLIP18.05■□□□□ 0.48
GTF3A-204ENST00000438571 OCIAD1Q9NX40 245 aa18.05■□□□□ 0.48
GTF3A-204ENST00000438571 RCOR3Q9P2K3 495 aaPredicted RBP18.05■□□□□ 0.48
GTF3A-204ENST00000438571 TLN1Q9Y490 2541 aaKnown RBP18.04■□□□□ 0.48
GTF3A-204ENST00000438571 FADS2P1A8MWK0 482 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 HGSO14964 777 aaPredicted RBP18.04■□□□□ 0.48
GTF3A-204ENST00000438571 GYPCP04921 128 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 ITGB6P18564 788 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 EPHB1P54762 984 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 SLC10A2Q12908 348 aaPredicted RBP18.04■□□□□ 0.48
GTF3A-204ENST00000438571 ANKRD20A8PQ5CZ79 823 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 CCDC122Q5T0U0 273 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 ALKBH5Q6P6C2 394 aaKnown RBP18.04■□□□□ 0.48
GTF3A-204ENST00000438571 PRICKLE2Q7Z3G6 844 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 PQLC3Q8N755 202 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 PACSIN1Q9BY11 444 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 KCNK4Q9NYG8 393 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 SEPT10Q9P0V9 454 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 CNOT6Q9ULM6 557 aaKnown RBP18.04■□□□□ 0.48
GTF3A-204ENST00000438571 B3GALT1Q9Y5Z6 326 aa18.04■□□□□ 0.48
GTF3A-204ENST00000438571 SYCE3A1L190 88 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 CYSRT1A8MQ03 144 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.03■□□□□ 0.48
GTF3A-204ENST00000438571 MYO1FO00160 1098 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 MATN3O15232 486 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 DNAJC6O75061 913 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 ASMTLO95671 621 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 MMP2P08253 660 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 ZNF30P17039 623 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 GPR3P46089 330 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 ZBED6P86452 979 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 TBR1Q16650 682 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 ZNF765Q7L2R6 523 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 GALNT13Q8IUC8 556 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 OR4D9Q8NGE8 314 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 SYN2Q92777 582 aaPredicted RBP18.03■□□□□ 0.48
GTF3A-204ENST00000438571 ART4Q93070 314 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 NKD1Q969G9 470 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 ZNF670Q9BS34 389 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 BRD8Q9H0E9 1235 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 ARFGAP3Q9NP61 516 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 KCNK6Q9Y257 313 aa18.03■□□□□ 0.48
GTF3A-204ENST00000438571 STMND1H3BQB6 276 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 CD82P27701 267 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 FASLGP48023 281 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 UBASH3AP57075 661 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 CLCA4Q14CN2 919 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 IFI16Q16666 785 aaKnown RBP18.02■□□□□ 0.48
GTF3A-204ENST00000438571 QPCTQ16769 361 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 HADHQ16836 314 aaKnown RBP18.02■□□□□ 0.48
GTF3A-204ENST00000438571 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-204ENST00000438571 TIGD7Q6NT04 549 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-204ENST00000438571 CHST15Q7LFX5 561 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-204ENST00000438571 SFRP1Q8N474 314 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 FAF2Q96CS3 445 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 TAAR9Q96RI9 348 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 ARHGAP9Q9BRR9 750 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 PCDH9Q9HC56 1237 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 AKAP7Q9P0M2 348 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-204ENST00000438571 TBC1D29Q9UFV1 150 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 CAPN11Q9UMQ6 739 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 PCDHB11Q9Y5F2 797 aa18.02■□□□□ 0.48
GTF3A-204ENST00000438571 BZW2Q9Y6E2 419 aaKnown RBP18.02■□□□□ 0.48
GTF3A-204ENST00000438571 C1orf232A0A0U1RR37 186 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 EFCAB7A8K855 629 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 A8MU76 341 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 PROSCO94903 275 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 CCNCP24863 283 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 UGT1A3P35503 534 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 CD86P42081 329 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 ZBTB17Q13105 803 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 GALNT3Q14435 633 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 CLPPQ16740 277 aaPredicted RBP18.01■□□□□ 0.47
GTF3A-204ENST00000438571 SNAP47Q5SQN1 464 aa18.01■□□□□ 0.47
GTF3A-204ENST00000438571 ZNF648Q5T619 568 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms