RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 HAUS4Q9H6D7 363 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 RDH14Q9HBH5 336 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 TRNAU1APQ9NX07 287 aaKnown RBP7.75□□□□□ -1.17
VPS50-204ENST00000438395 CWC15Q9P013 229 aaKnown RBP7.75□□□□□ -1.17
VPS50-204ENST00000438395 TAAR2Q9P1P5 351 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 ACSL6Q9UKU0 697 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 DNPEPQ9ULA0 475 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 PCDHGC4Q9Y5F7 938 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 RP1P56715 2156 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 A0A1B0GTH6 734 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 A0A1W2PQC6 194 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 STMND1H3BQB6 276 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 PSMD11O00231 422 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 TRAFD1O14545 582 aaPredicted RBP7.74□□□□□ -1.17
VPS50-204ENST00000438395 HGSO14964 777 aaPredicted RBP7.74□□□□□ -1.17
VPS50-204ENST00000438395 CASC3O15234 703 aaKnown RBP7.74□□□□□ -1.17
VPS50-204ENST00000438395 EFSO43281 561 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 HTRA2O43464 458 aaPredicted RBP7.74□□□□□ -1.17
VPS50-204ENST00000438395 PYGLP06737 847 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 ITIH1P19827 911 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 MX2P20592 715 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 CSTF2P33240 577 aaKnown RBP eCLIP7.74□□□□□ -1.17
VPS50-204ENST00000438395 GJC1P36383 396 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 TRIM23P36406 574 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 ETV3P41162 512 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 GPR1P46091 355 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 OR1D5P58170 312 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 CDK3Q00526 305 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 PIGHQ14442 188 aaPredicted RBP7.74□□□□□ -1.17
VPS50-204ENST00000438395 TGIF1Q15583 401 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 DPYSL2Q16555 572 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 HADHQ16836 314 aaKnown RBP7.74□□□□□ -1.17
VPS50-204ENST00000438395 ANO6Q4KMQ2 910 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 CCDC122Q5T0U0 273 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 ZFYVE27Q5T4F4 411 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 KCTD16Q68DU8 428 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 OGFOD3Q6PK18 319 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 ZNF571Q7Z3V5 609 aaPredicted RBP7.74□□□□□ -1.17
VPS50-204ENST00000438395 VASH2Q86V25 355 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 FAM129CQ86XR2 697 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 GALNT13Q8IUC8 556 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 LRRC49Q8IUZ0 686 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 SLITRK4Q8IW52 837 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 DEPDC4Q8N2C3 294 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 AGBL5Q8NDL9 886 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 CCL4L1Q8NHW4 92 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 USP7Q93009 1102 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 COQ10AQ96MF6 247 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 CSPG4P5Q96PW8 444 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 OR2M4Q96R27 311 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 DPYSL5Q9BPU6 564 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 MGME1Q9BQP7 344 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 LGR4Q9BXB1 951 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 TEX101Q9BY14 249 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 POLR1EQ9GZS1 481 aaKnown RBP7.74□□□□□ -1.17
VPS50-204ENST00000438395 NOD2Q9HC29 1040 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 NT5MQ9NPB1 228 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 KCNK4Q9NYG8 393 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 IP6K2Q9UHH9 426 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 PHTF1Q9UMS5 762 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 SUFUQ9UMX1 484 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 NAV2Q8IVL1 2488 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 LRRK2Q5S007 2527 aa7.74□□□□□ -1.17
VPS50-204ENST00000438395 SHROOM3Q8TF72 1996 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 NPIPB15A6NHN6 443 aaPredicted RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 TMEM229AB2RXF0 380 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 DDX3XO00571 662 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS50-204ENST00000438395 DUX1O43812 170 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 PGLSO95336 258 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ASMTLO95671 621 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ECEL1O95672 775 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 IVLP07476 585 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 CTPS1P17812 591 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 AMPD1P23109 780 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 TEAD1P28347 426 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 MAN1A1P33908 653 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 PRKCIP41743 596 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 GPR3P46089 330 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 MAXP61244 160 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 CTBSQ01459 385 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ZFP36L1Q07352 338 aaKnown RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 TRAF2Q12933 501 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 TRA2AQ13595 282 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS50-204ENST00000438395 LRP8Q14114 963 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 UBAP2LQ14157 1087 aaKnown RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 NCAPHQ15003 741 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 NFKBIBQ15653 356 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 TIGD7Q6NT04 549 aaPredicted RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 Q6ZVL8 140 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 MARK2Q7KZI7 788 aaKnown RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 APTXQ7Z2E3 356 aaKnown RBP7.73□□□□□ -1.17
VPS50-204ENST00000438395 HSD11B1LQ7Z5J1 315 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ZFAND4Q86XD8 727 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS50-204ENST00000438395 IL22RA1Q8N6P7 574 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 ARFGAP1Q8N6T3 406 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 OR10G6Q8NH81 332 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 GPBAR1Q8TDU6 330 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 TEKT4Q8WW24 435 aa7.73□□□□□ -1.17
VPS50-204ENST00000438395 EXTL1Q92935 676 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms