RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 RRN3Q9NYV6 651 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 SLC13A4Q9UKG4 626 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 DLGAP4Q9Y2H0 992 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 OR2W1Q9Y3N9 320 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 RNF215Q9Y6U7 377 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 MAPKBP1O60336 1514 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 CCDC196A0A1B0GTZ2 297 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 A0A1B0GVC2 190 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 PEX12O00623 359 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 BCAT2O15382 392 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 IGLV1-44P01699 117 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 MMP2P08253 660 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 CORO1AP31146 461 aaKnown RBP3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 MMP14P50281 582 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 EFNA5P52803 228 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 RAD23BP54727 409 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 HNRNPH2P55795 449 aaKnown RBP3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 DSCR10P59022 87 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 ISL1P61371 349 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 GNB1P62873 340 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 PDE1BQ01064 536 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 CHRNDQ07001 517 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 GAGE5Q13069 117 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 GAGE6Q13070 117 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 GTF2H2Q13888 395 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 CCDC96Q2M329 555 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 EIF2S3LQ2VIR3 472 aaKnown RBP3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 CCDC70Q6NSX1 233 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 ANKRD54Q6NXT1 300 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 GTF2H2CQ6P1K8 395 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 ATF7IPQ6VMQ6 1270 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 MMS22LQ6ZRQ5 1243 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 ASB18Q6ZVZ8 466 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 BBS12Q6ZW61 710 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 NOXA1Q86UR1 476 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 FAM160B2Q86V87 743 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 APLFQ8IW19 511 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 OR2AK2Q8NG84 335 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 CEP70Q8NHQ1 597 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 RILPL2Q969X0 211 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 MTERF1Q99551 399 aaKnown RBP3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 NAP1L4Q99733 375 aaKnown RBP3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 CLSTN3Q9BQT9 956 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 MROH8Q9H579 483 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 PDZD7Q9H5P4 517 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 STN1Q9H668 368 aaKnown RBP3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 RIC8AQ9NPQ8 531 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 SLC52A3Q9NQ40 469 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 ALKBH4Q9NXW9 302 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 DNAJC16Q9Y2G8 782 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 RRP7AQ9Y3A4 280 aaKnown RBP3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 STON1Q9Y6Q2 735 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 SIGLEC1Q9BZZ2 1709 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 ABCC8Q09428 1581 aa3.04□□□□□ -1.92
HMGB1P31-201ENST00000437242 ABCC2Q92887 1545 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 RRN3P2A6NIE6 340 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 KRTAP16-1A8MUX0 517 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 HOXC11O43248 304 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 CAVIN2O95810 425 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 IGHV4-39P01824 125 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 CYC1P08574 325 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 SP100P23497 879 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 PAX3P23760 479 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 DCTP40126 519 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 CLK1P49759 484 aaKnown RBP3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 INTS11Q5TA45 600 aaKnown RBP3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 NAA35Q5VZE5 725 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 SUSD1Q6UWL2 747 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 NOTCH2NLQ7Z3S9 236 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 NAXEQ8NCW5 288 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 BEST2Q8NFU1 509 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 WDR20Q8TBZ3 569 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 ZNF689Q96CS4 500 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 SCRN2Q96FV2 425 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 ART5Q96L15 291 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 COG8Q96MW5 612 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 CD180Q99467 661 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 CMKLR1Q99788 373 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 WDR13Q9H1Z4 485 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 TFB2MQ9H5Q4 396 aaKnown RBP3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 MKKSQ9NPJ1 570 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 WASH6PQ9NQA3 447 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 BABAM1Q9NWV8 329 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 C9orf78Q9NZ63 289 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 CTNNAL1Q9UBT7 734 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 TMEM98Q9Y2Y6 226 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 LOXL2Q9Y4K0 774 aa3.03□□□□□ -1.92
HMGB1P31-201ENST00000437242 PRG4Q92954 1404 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 MAP3K4Q9Y6R4 1608 aa3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 IGLV5-45A0A087WSX0 123 aa3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 NR5A2O00482 541 aa3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 DDX5P17844 614 aaKnown RBP3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 XBP1P17861 261 aa3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 EDN2P20800 178 aa3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 BDKRB2P30411 391 aa3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 DDIT3P35638 169 aa3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 CSRP3P50461 194 aa3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 TRPC3Q13507 836 aa3.02□□□□□ -1.93
HMGB1P31-201ENST00000437242 SLC12A1Q13621 1099 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms