RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SCRN2Q96FV2 425 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 ZIM3Q96PE6 472 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 DEPDC7Q96QD5 511 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 MCCC1Q96RQ3 725 aaPredicted RBP7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 RSPH9Q9H1X1 276 aaPredicted RBP7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 VIPAS39Q9H9C1 493 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 MRM3Q9HC36 420 aaKnown RBP7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 MAGEE1Q9HCI5 957 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 SMYD2Q9NRG4 433 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 TREX1Q9NSU2 369 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 POLR3BQ9NW08 1133 aaPredicted RBP7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 SAMD15Q9P1V8 674 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 DKK3Q9UBP4 350 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 PPT2Q9UMR5 302 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 PHTF1Q9UMS5 762 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 NDRG2Q9UN36 371 aaKnown RBP7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 SLC6A14Q9UN76 642 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 PLAAQ9Y263 795 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 ARL5AQ9Y689 179 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 RPS6KL1Q9Y6S9 549 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 SZT2Q5T011 3432 aa7.04□□□□□ -1.28
LSM3P3-201ENST00000436601 A0A087WUV0 522 aaPredicted RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 CAPN8A6NHC0 703 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 FAM159BA6NKW6 160 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 C16orf96A6NNT2 1141 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ADARB2-AS1A8MUL3 147 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 A8MX80 341 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 CXorf49A8MYA2 514 aaPredicted RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 PLK4O00444 970 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 KPNA3O00505 521 aaPredicted RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 CCL22O00626 93 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ATP8B1O43520 1251 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 SYNCRIPO60506 623 aaKnown RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 SPAG6O75602 509 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 PAPSS2O95340 614 aaPredicted RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 CRTAMO95727 393 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 IL1BP01584 269 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ERVK-10P10266 1014 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 LHCGRP22888 699 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ITGB7P26010 798 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 GCAP28676 217 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 PHBP35232 272 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ARCN1P48444 511 aaKnown RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ZNF140P52738 457 aaPredicted RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 COPAP53621 1224 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 RPS14P62263 151 aaKnown RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 POLR2LP62875 67 aaKnown RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 SATB1Q01826 763 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ACVR1Q04771 509 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ZNF844Q08AG5 666 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 EFTUD2Q15029 972 aaKnown RBP eCLIP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 CNGA3Q16281 694 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 KBTBD12Q3ZCT8 623 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 LRRC73Q5JTD7 316 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 CRTC1Q6UUV9 634 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 LRIG3Q6UXM1 1119 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 Q6ZS52 159 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 PARS2Q7L3T8 475 aaKnown RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 NLRP9Q7RTR0 991 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 TRMT11Q7Z4G4 463 aaKnown RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 DSG4Q86SJ6 1040 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 TTC7BQ86TV6 843 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 TSPAN33Q86UF1 283 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 UBALD2Q8IYN6 164 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 RPLP0P6Q8NHW5 317 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 FBXO27Q8NI29 283 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 NANOS1Q8WY41 292 aaKnown RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 TTC9Q92623 222 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 DNAJC1Q96KC8 554 aaKnown RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 LYSMD1Q96S90 227 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 TMEM109Q9BVC6 243 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 MKRN2Q9H000 416 aaKnown RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 SLC6A17Q9H1V8 727 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ACSS3Q9H6R3 686 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 LMAN1LQ9HAT1 526 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 PCDH12Q9NPG4 1184 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 IL1RAPL1Q9NZN1 696 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 HACD3Q9P035 362 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 B4GALT6Q9UBX8 382 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 MUTYHQ9UIF7 546 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 RIMKLBQ9ULI2 386 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 ZNF711Q9Y462 761 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 DOCK8Q8NF50 2099 aa7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 MUC22E2RYF6 1773 aaPredicted RBP7.03□□□□□ -1.28
LSM3P3-201ENST00000436601 CHD5Q8TDI0 1954 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 C1orf232A0A0U1RR37 186 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 KANSL1LA0AUZ9 987 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 FAM170BA6NMN3 283 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 C2orf81A6NN90 581 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 UPK3BL1B0FP48 263 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 UPK3BL2E5RIL1 263 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 C1QTNF3-AMACRE9PGA6 284 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 AREL1O15033 823 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 SMAD7O15105 426 aaKnown RBP7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 UGT1A9O60656 530 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 TCEA3O75764 348 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 VAPBO95292 243 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 CLDN7O95471 211 aa7.02□□□□□ -1.29
LSM3P3-201ENST00000436601 ARAFP10398 606 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms