RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 UNQ6494/PRO21346Q6UXR6 183 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 NYAP1Q6ZVC0 841 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 TMC3Q7Z5M5 1100 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 TAF8Q7Z7C8 310 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 SLC35F3Q8IY50 421 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 SLC25A41Q8N5S1 370 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 IPMKQ8NFU5 416 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 GATA6Q92908 595 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 NAT6Q93015 286 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 COX14Q96I36 57 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 WDR24Q96S15 920 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 FRMD8P1Q9BZ68 369 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-207ENST00000435455 CARD9Q9H257 536 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 TRNAU1APQ9NX07 287 aaKnown RBP16.17■□□□□ 0.18
SMPD4-207ENST00000435455 SLC17A4Q9Y2C5 497 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 PPP2R2CQ9Y2T4 447 aa16.17■□□□□ 0.18
SMPD4-207ENST00000435455 AAR2Q9Y312 384 aaKnown RBP16.17■□□□□ 0.18
SMPD4-207ENST00000435455 RP1P56715 2156 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 MYLKQ15746 1914 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 C5orf60A6NFR6 353 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 PSMB4P28070 264 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 ILF3Q12906 894 aaKnown RBP eCLIP16.16■□□□□ 0.188e-7■■■□□ 15
SMPD4-207ENST00000435455 TCEA2Q15560 299 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 PDPK2PQ6A1A2 396 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 DOK6Q6PKX4 331 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 ARL10Q8N8L6 244 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 SLC35B2Q8TB61 432 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 IFI44Q8TCB0 444 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 ANP32BQ92688 251 aaKnown RBP16.16■□□□□ 0.18
SMPD4-207ENST00000435455 LRRC45Q96CN5 670 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 EID2BQ96D98 161 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 SCARF2Q96GP6 870 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-207ENST00000435455 AGAP2Q99490 1192 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 ZSCAN5AQ9BUG6 496 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 SPATA16Q9BXB7 569 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 TMEM168Q9H0V1 697 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 SUFUQ9UMX1 484 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 R3HDM2Q9Y2K5 976 aaKnown RBP16.16■□□□□ 0.18
SMPD4-207ENST00000435455 SPO11Q9Y5K1 396 aa16.16■□□□□ 0.18
SMPD4-207ENST00000435455 ZFC3H1O60293 1989 aaKnown RBP16.15■□□□□ 0.18
SMPD4-207ENST00000435455 TCRBV7S2A1N4TA0A589 114 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 CPED1A4D0V7 1026 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 EME2A4GXA9 379 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-207ENST00000435455 TMEM8BA6NDV4 472 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 INPP4BO15327 924 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 OPA1O60313 960 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 SLC4A1P02730 911 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 MYF5P13349 255 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 JUPP14923 745 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 HMGCLP35914 325 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 CHRNA4P43681 627 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 GNPDA1P46926 289 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 POLD2P49005 469 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 PEX6Q13608 980 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 ZNF569Q5MCW4 686 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 HES3Q5TGS1 186 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 ARHGEF18Q6ZSZ5 1173 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 SLC13A5Q86YT5 568 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-207ENST00000435455 CACTIN-AS1Q8N1I8 211 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 FAM71DQ8N9W8 422 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 GPR26Q8NDV2 337 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 FAM46DQ8NEK8 389 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 OR6C4Q8NGE1 309 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 CCDC110Q8TBZ0 833 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 GPBAR1Q8TDU6 330 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 PLEKHG4BQ96PX9 1271 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 FICDQ9BVA6 458 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 GSDMCQ9BYG8 508 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 ABCG4Q9H172 646 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 SUDS3Q9H7L9 328 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-207ENST00000435455 VPS18Q9P253 973 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 GULP1Q9UBP9 304 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 CNOT6Q9ULM6 557 aaKnown RBP16.15■□□□□ 0.18
SMPD4-207ENST00000435455 PADI4Q9UM07 663 aa16.15■□□□□ 0.18
SMPD4-207ENST00000435455 USP24Q9UPU5 2620 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 FADS2P1A8MWK0 482 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 ASMTLO95671 621 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 AGTP01019 485 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 FUCA1P04066 466 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 PROS1P07225 676 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 BPIP17213 487 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 ADCY8P40145 1251 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 INSM1Q01101 510 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-207ENST00000435455 ZDHHC20Q5W0Z9 365 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 ALS2CLQ60I27 953 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 GUSBP11Q6P575 273 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 RANBP10Q6VN20 620 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 EFL1Q7Z2Z2 1120 aaKnown RBP16.14■□□□□ 0.17
SMPD4-207ENST00000435455 GLT6D1Q7Z4J2 308 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 TRIM74Q86UV6 250 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 GALNT13Q8IUC8 556 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 TTC30BQ8N4P2 665 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 TRAM1L1Q8N609 369 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 KYQ8NBH2 561 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 MAPK15Q8TD08 544 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 BLOC1S5Q8TDH9 187 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 OR2M4Q96R27 311 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 GORASP1Q9BQQ3 440 aa16.14■□□□□ 0.17
SMPD4-207ENST00000435455 TMEM121BQ9BXQ6 578 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-207ENST00000435455 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.14■□□□□ 0.174e-7■■■□□ 17.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms