RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 HOXA2O43364 376 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 GFAPP14136 432 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 TLR1Q15399 786 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 EML3Q32P44 896 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 SETMARQ53H47 684 aaPredicted RBP18.52■□□□□ 0.55
CLK1-205ENST00000434813 PRSS55Q6UWB4 352 aaPredicted RBP18.52■□□□□ 0.55
CLK1-205ENST00000434813 TAS1R1Q7RTX1 841 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 ARPINQ7Z6K5 226 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 TMEM102Q8N9M5 508 aaPredicted RBP18.52■□□□□ 0.55
CLK1-205ENST00000434813 STAG3L4Q8TBR4 150 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 BCL7CQ8WUZ0 217 aaPredicted RBP18.52■□□□□ 0.55
CLK1-205ENST00000434813 ROPN1LQ96C74 230 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 RMDN1Q96DB5 314 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 SCLYQ96I15 445 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 NACA2Q9H009 215 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 TMEM181Q9P2C4 612 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 CROTQ9UKG9 612 aa18.52■□□□□ 0.55
CLK1-205ENST00000434813 PRORSD1PA6NEY8 169 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 DNAJA2O60884 412 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 GJB5O95377 273 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 PRLP01236 227 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 SCNN1BP51168 640 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 CCL23P55773 120 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 SAMD4BQ5PRF9 694 aaKnown RBP18.51■□□□□ 0.55
CLK1-205ENST00000434813 SLC8B1Q6J4K2 584 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 CHST9Q7L1S5 443 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 PHYKPLQ8IUZ5 450 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 FUNDC1Q8IVP5 155 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 SNX31Q8N9S9 440 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 FBXO22Q8NEZ5 403 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 MDGA1Q8NFP4 955 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 EXOC2Q96KP1 924 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 ZNF512Q96ME7 567 aaPredicted RBP18.51■□□□□ 0.55
CLK1-205ENST00000434813 CENPKQ9BS16 269 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 CCDC68Q9H2F9 335 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 CWH43Q9H720 699 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 SCUBE2Q9NQ36 999 aa18.51■□□□□ 0.55
CLK1-205ENST00000434813 ZNF840PA6NDX5 716 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 LRRC14BA6NHZ5 514 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 PPP6CO00743 305 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 PIP5K1BO14986 540 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 CLASP2O75122 1294 aaKnown RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 RNASEH2AO75792 299 aaKnown RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 PARNO95453 639 aaKnown RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 RHOCP08134 193 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 CES1P23141 567 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 HSPA13P48723 471 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 FOXA1P55317 472 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 RHDQ02161 417 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 RAD51Q06609 339 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 RALGDSQ12967 914 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 LCP2Q13094 533 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 HECTD3Q5T447 861 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 PAQR3Q6TCH7 311 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 SLC39A5Q6ZMH5 540 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 ANKRD33Q7Z3H0 272 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 DENND1CQ8IV53 801 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 MFN1Q8IWA4 741 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 CRIPAKQ8N1N5 446 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 DUS3LQ96G46 650 aaKnown RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 NSUN5Q96P11 429 aaKnown RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 RNF112Q9ULX5 631 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 VPS9D1Q9Y2B5 631 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 OAS3Q9Y6K5 1087 aaKnown RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 C2orf81A6NN90 581 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 SUPT3HB4E1H0 165 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 ADAM12O43184 909 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 COCHO43405 550 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 SUPT3HO75486 399 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 NDUFS3O75489 264 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 RPS17P08708 135 aaKnown RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 FMO4P31512 558 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 NAA20P61599 178 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 IRX1P78414 480 aaPredicted RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 GEN1Q17RS7 908 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 KIF19Q2TAC6 998 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 LIN52Q52LA3 116 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 C6orf10Q5SRN2 563 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 FBXO39Q8N4B4 442 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 PCYOX1LQ8NBM8 494 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 PCDHAC1Q9H158 963 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 PIDD1Q9HB75 910 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 MTRRQ9UBK8 725 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 CNOT11Q9UKZ1 510 aaKnown RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 AGO1Q9UL18 857 aaKnown RBP18.5■□□□□ 0.55
CLK1-205ENST00000434813 FAM50BQ9Y247 325 aa18.5■□□□□ 0.55
CLK1-205ENST00000434813 A0A1B0GVM2 712 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 SYCE1LA8MT33 242 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 EEF1DP29692 281 aaKnown RBP18.49■□□□□ 0.55
CLK1-205ENST00000434813 TUFMP49411 452 aaKnown RBP18.49■□□□□ 0.55
CLK1-205ENST00000434813 CLCN2P51788 898 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 CLCQ05315 142 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 CYTH1Q15438 398 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 IL23RQ5VWK5 629 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 LPCAT1Q8NF37 534 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 TRPC4APQ8TEL6 797 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 ATP6V1E2Q96A05 226 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 C1QTNF3Q9BXJ4 246 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 IKZF3Q9UKT9 509 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 PTGDR2Q9Y5Y4 395 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms