RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 A0A0J9YYE9 177 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 TYW5A2RUC4 315 aaKnown RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 AQP12BA6NM10 295 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 PIP5K1BO14986 540 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 CLASP2O75122 1294 aaKnown RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 RNASEH2AO75792 299 aaKnown RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 VNN2O95498 520 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 MLYCDO95822 493 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 CHEK2O96017 543 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 FAM58BPP0C7Q3 252 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 MTHFD2P13995 350 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 PKMP14618 531 aaKnown RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 CR2P20023 1033 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 TCN1P20061 433 aaPredicted RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 EEF1DP29692 281 aaKnown RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 FMO4P31512 558 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 SLC6A4P31645 630 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 MSX2P35548 267 aaPredicted RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 TTPAP49638 278 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 CLCN4P51793 760 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 POLE2P56282 527 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 CLCQ05315 142 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 DYNC1I2Q13409 638 aaKnown RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 PFKFB4Q16877 469 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 HECTD3Q5T447 861 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 IL23RQ5VWK5 629 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 OGFOD2Q6N063 350 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 UGT3A1Q6NUS8 523 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 CYHR1Q6ZMK1 362 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 ZNF783Q6ZMS7 281 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 AQP12AQ8IXF9 295 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 DDIASQ8IXT1 998 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 MINDY1Q8N5J2 469 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 SPDYE1Q8NFV5 336 aaPredicted RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 TRPC4APQ8TEL6 797 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 ZNF483Q8TF39 744 aaPredicted RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 NCSTNQ92542 709 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 ATP6V1E2Q96A05 226 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 EME1Q96AY2 570 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 MYEOVQ96EZ4 313 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 HHIPL1Q96JK4 782 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 TDRD1Q9BXT4 1180 aaKnown RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 ADGRE3Q9BY15 652 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 CRISPLD1Q9H336 500 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 MUC13Q9H3R2 512 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 STARD7Q9NQZ5 370 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 AGO1Q9UL18 857 aaKnown RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 SPO11Q9Y5K1 396 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 OAS3Q9Y6K5 1087 aaKnown RBP10.38□□□□□ -0.75
CD44-210ENST00000434472 COMMD3-BMI1R4GMX3 469 aa10.38□□□□□ -0.75
CD44-210ENST00000434472 A0A0D9SEW6 157 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 A0A1B0GVM2 712 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 PRORSD1PA6NEY8 169 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 H3BNC9 293 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 ARVCFO00192 962 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 ANGPT2O15123 496 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 KLK8O60259 260 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 RPS17P08708 135 aaKnown RBP10.37□□□□□ -0.75
CD44-210ENST00000434472 ALDOCP09972 364 aaKnown RBP10.37□□□□□ -0.75
CD44-210ENST00000434472 PIRTP0C851 137 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 TSPAN8P19075 237 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 RPL5P46777 297 aaKnown RBP10.37□□□□□ -0.75
CD44-210ENST00000434472 SCNN1BP51168 640 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 SLC7A2P52569 658 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 CDH13P55290 713 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 SP3Q02447 781 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 INPP5AQ14642 412 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 PTPRCAPQ14761 206 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 CYTH1Q15438 398 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 CNPY1Q3B7I2 92 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 RTP2Q5QGT7 225 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 PAQR3Q6TCH7 311 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 RSPO2Q6UXX9 243 aaPredicted RBP10.37□□□□□ -0.75
CD44-210ENST00000434472 NPAS4Q8IUM7 802 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 FUNDC1Q8IVP5 155 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 HOMEZQ8IX15 550 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 CFAP52Q8N1V2 620 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 STK40Q8N2I9 435 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 OR4K2Q8NGD2 314 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 OR2T34Q8NGX1 318 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 OR2T3Q8NH03 318 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 TUBGCP3Q96CW5 907 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 C3orf30Q96M34 536 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 SH3GL3Q99963 347 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 GPATCH1Q9BRR8 931 aaKnown RBP10.37□□□□□ -0.75
CD44-210ENST00000434472 OSBPL11Q9BXB4 747 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 CWH43Q9H720 699 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 FBRSL1Q9HCM7 1045 aaKnown RBP10.37□□□□□ -0.75
CD44-210ENST00000434472 ARMC1Q9NVT9 282 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 RNF186Q9NXI6 227 aa10.37□□□□□ -0.75
CD44-210ENST00000434472 TRMT6Q9UJA5 497 aaKnown RBP10.37□□□□□ -0.75
CD44-210ENST00000434472 ATP6AP2A0A1C7CYW4 349 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 A0A1W2PQ45 241 aaPredicted RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 A0A1W2PQY0 241 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 DYTNA2CJ06 578 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 H3BMM5 538 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 NR5A2O00482 541 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 GIPC1O14908 333 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 STX7O15400 261 aaKnown RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 MAP3K13O43283 966 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms