RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 NLRP8Q86W28 1048 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 CDKL3Q8IVW4 592 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-221ENST00000430433 RAVER1Q8IY67 606 aaKnown RBP11.29□□□□□ -0.6
MRPL55-221ENST00000430433 ZNF567Q8N184 647 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 OR6C4Q8NGE1 309 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 CCL4L1Q8NHW4 92 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 WDR48Q8TAF3 677 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 ACTL9Q8TC94 416 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 ALG3Q92685 438 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 TADA1Q96BN2 335 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 OR2M4Q96R27 311 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 NRSN2Q9GZP1 204 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 CDH19Q9H159 772 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 MAGEE1Q9HCI5 957 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 RAD18Q9NS91 495 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 TRNAU1APQ9NX07 287 aaKnown RBP11.29□□□□□ -0.6
MRPL55-221ENST00000430433 DKK4Q9UBT3 224 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 FAM153AQ9UHL3 310 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 RSPH14Q9UHP6 348 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 TRHDEQ9UKU6 1024 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 SLC17A4Q9Y2C5 497 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 RAXQ9Y2V3 346 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 ZNF711Q9Y462 761 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 GPSM3Q9Y4H4 160 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 PCDHB1Q9Y5F3 818 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 MYLKQ15746 1914 aa11.29□□□□□ -0.6
MRPL55-221ENST00000430433 FREM2Q5SZK8 3169 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 A0A0U1RQJ8 604 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 MIF4GDA9UHW6 222 aaKnown RBP11.28□□□□□ -0.6
MRPL55-221ENST00000430433 TAF4O00268 1085 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 USP12O75317 370 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 TJP3O95049 919 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 FTCDO95954 541 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 FUCA1P04066 466 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 PYGMP11217 842 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 RBL1P28749 1068 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 CD68P34810 354 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-221ENST00000430433 ADCY8P40145 1251 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 EIF3EP60228 445 aaKnown RBP11.28□□□□□ -0.6
MRPL55-221ENST00000430433 BIRC2Q13490 618 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 SPIDRQ14159 915 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 RTP5Q14D33 572 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 ISXQ2M1V0 245 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 C14orf28Q4W4Y0 310 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 ZNF569Q5MCW4 686 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 HENMT1Q5T8I9 393 aaKnown RBP11.28□□□□□ -0.6
MRPL55-221ENST00000430433 ITPRIPL1Q6GPH6 555 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 DARS2Q6PI48 645 aaKnown RBP11.28□□□□□ -0.6
MRPL55-221ENST00000430433 KDELC1Q6UW63 502 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 GALNT13Q8IUC8 556 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 SLC25A41Q8N5S1 370 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 IPMKQ8NFU5 416 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 GPBAR1Q8TDU6 330 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 PTCD2Q8WV60 388 aaKnown RBP11.28□□□□□ -0.6
MRPL55-221ENST00000430433 SRPK1Q96SB4 655 aaKnown RBP11.28□□□□□ -0.6
MRPL55-221ENST00000430433 FAM118BQ9BPY3 351 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 HERPUD2Q9BSE4 406 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 SPATA16Q9BXB7 569 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 FSD1LQ9BXM9 530 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 C10orf88Q9H8K7 445 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 TAAR2Q9P1P5 351 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 PACSIN2Q9UNF0 486 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-221ENST00000430433 RP1P56715 2156 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 CHD6Q8TD26 2715 aa11.28□□□□□ -0.6
MRPL55-221ENST00000430433 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 FADS2P1A8MWK0 482 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 KCNN4O15554 427 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 NOBOXO60393 691 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 TCEA3O75764 348 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 ATP1A1P05023 1023 aaKnown RBP11.27□□□□□ -0.61
MRPL55-221ENST00000430433 RBP3P10745 1247 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 AK4P27144 223 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-221ENST00000430433 ACTR1BP42025 376 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 ACTR1AP61163 376 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 CTBSQ01459 385 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 MPP3Q13368 585 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 PEX6Q13608 980 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 CERCAMQ5T4B2 595 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 AADACL2Q6P093 401 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 OGFOD3Q6PK18 319 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 SFTPA2Q8IWL1 248 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 Q8N9G6 341 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-221ENST00000430433 GPR156Q8NFN8 814 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 ZDHHC1Q8WTX9 485 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 OXNAD1Q96HP4 312 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-221ENST00000430433 COX14Q96I36 57 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 FCRL5Q96RD9 977 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 GFM1Q96RP9 751 aaKnown RBP11.27□□□□□ -0.61
MRPL55-221ENST00000430433 WDR24Q96S15 920 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 ZSCAN5AQ9BUG6 496 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 TSGA10Q9BZW7 698 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 GBA3Q9H227 469 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 SPATS2LQ9NUQ6 558 aaKnown RBP11.27□□□□□ -0.61
MRPL55-221ENST00000430433 VPS18Q9P253 973 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 ZNHIT2Q9UHR6 403 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 RABGEF1Q9UJ41 708 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 SPO11Q9Y5K1 396 aa11.27□□□□□ -0.61
MRPL55-221ENST00000430433 LOC285095A0A1B0GVY8 99 aa11.26□□□□□ -0.61
MRPL55-221ENST00000430433 BRINP1O60477 761 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms