RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ZNF830Q96NB3 372 aaPredicted RBP16.99■□□□□ 0.31
TRIM39-209ENST00000428728 TSGA13Q96PP4 275 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 DEF6Q9H4E7 631 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 PCDH9Q9HC56 1237 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 DNPEPQ9ULA0 475 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.31
TRIM39-209ENST00000428728 C1orf232A0A0U1RR37 186 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 KCNK1O00180 336 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 NVLO15381 856 aaKnown RBP16.98■□□□□ 0.31
TRIM39-209ENST00000428728 ZIC2O95409 532 aaPredicted RBP16.98■□□□□ 0.31
TRIM39-209ENST00000428728 CLDN7O95471 211 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 PRLP01236 227 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 TPM3P06753 285 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 LIPCP11150 499 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 PLA2G2AP14555 144 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 MX2P20592 715 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 PPM1FP49593 454 aaPredicted RBP16.98■□□□□ 0.31
TRIM39-209ENST00000428728 SLC10A2Q12908 348 aaPredicted RBP16.98■□□□□ 0.31
TRIM39-209ENST00000428728 MESDQ14696 234 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 NR1D2Q14995 579 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 SLC18A3Q16572 532 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 FAM182AQ5T1J6 154 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 NKAIN2Q5VXU1 208 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 ZNF605Q86T29 641 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 VASH2Q86V25 355 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 ZFAND4Q86XD8 727 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 ZNF761Q86XN6 746 aaPredicted RBP16.98■□□□□ 0.31
TRIM39-209ENST00000428728 GALNT13Q8IUC8 556 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 CCDC13Q8IYE1 715 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 RAPGEF5Q92565 580 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 FATE1Q969F0 183 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 WBP1Q96G27 269 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 SCARF2Q96GP6 870 aaPredicted RBP16.98■□□□□ 0.31
TRIM39-209ENST00000428728 CCDC74BQ96LY2 380 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 DTLQ9NZJ0 730 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 AKAP7Q9P0M2 348 aaPredicted RBP16.98■□□□□ 0.31
TRIM39-209ENST00000428728 AMACRQ9UHK6 382 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 ACSL6Q9UKU0 697 aa16.98■□□□□ 0.31
TRIM39-209ENST00000428728 IGHV5-10-1A0A0J9YXX1 117 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 LRRD1A4D1F6 860 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 C9orf172C9J069 976 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 PPM1DO15297 605 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 ZW10O43264 779 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 ATP1A1P05023 1023 aaKnown RBP16.97■□□□□ 0.31
TRIM39-209ENST00000428728 PYGLP06737 847 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 CES1P23141 567 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 KDELR1P24390 212 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 HNRNPH3P31942 346 aaKnown RBP16.97■□□□□ 0.31
TRIM39-209ENST00000428728 CSF2RBP32927 897 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 MAN1A1P33908 653 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 CD86P42081 329 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 PEX6Q13608 980 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 PYCR3Q53H96 274 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 NRSN1Q8IZ57 195 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 COX14Q96I36 57 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 CEP41Q9BYV8 373 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 PRKAB1Q9Y478 270 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 HEY1Q9Y5J3 304 aa16.97■□□□□ 0.31
TRIM39-209ENST00000428728 PCYT1BQ9Y5K3 369 aaPredicted RBP16.97■□□□□ 0.31
TRIM39-209ENST00000428728 OAS3Q9Y6K5 1087 aaKnown RBP16.97■□□□□ 0.31
TRIM39-209ENST00000428728 TRBV23OR9-2A0A075B6M9 112 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 EFSO43281 561 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 JCHAINP01591 159 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 TMEM253P0C7T8 217 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 CCL4P13236 92 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 CD1CP29017 333 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 GPR3P46089 330 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 RPL26P61254 145 aaKnown RBP16.96■□□□□ 0.31
TRIM39-209ENST00000428728 ZBTB17Q13105 803 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 GALNT3Q14435 633 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 QPCTQ16769 361 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 MANEAQ5SRI9 462 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 ZNF574Q6ZN55 896 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-209ENST00000428728 EXD1Q8NHP7 514 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-209ENST00000428728 SLC37A2Q8TED4 501 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 RNF157Q96PX1 679 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 KCNK4Q9NYG8 393 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 SEPT10Q9P0V9 454 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 ZNHIT2Q9UHR6 403 aa16.96■□□□□ 0.31
TRIM39-209ENST00000428728 RPL26L1Q9UNX3 145 aaKnown RBP16.96■□□□□ 0.31
TRIM39-209ENST00000428728 IGHV1OR21-1A0A087WYE8 117 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 FADS2P1A8MWK0 482 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 AKR1B10O60218 316 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 KALRNO60229 2985 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 EML2O95834 649 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 SLC4A1P02730 911 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 MMP2P08253 660 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 MPSTP25325 297 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 SPINT3P49223 89 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 ASTE1Q2TB18 679 aaPredicted RBP16.95■□□□□ 0.3
TRIM39-209ENST00000428728 HENMT1Q5T8I9 393 aaKnown RBP16.95■□□□□ 0.3
TRIM39-209ENST00000428728 CHST15Q7LFX5 561 aaPredicted RBP16.95■□□□□ 0.3
TRIM39-209ENST00000428728 PLD5Q8N7P1 536 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 OR8K1Q8NGG5 319 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 JPH3Q8WXH2 748 aaPredicted RBP16.95■□□□□ 0.3
TRIM39-209ENST00000428728 PMEPA1Q969W9 287 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 WDR24Q96S15 920 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 DNAJC7Q99615 494 aa16.95■□□□□ 0.3
TRIM39-209ENST00000428728 SPTLC3Q9NUV7 552 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms