RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RASGRP1O95267 797 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 CTSEP14091 401 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 SPAM1P38567 509 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 SRP54P61011 504 aaKnown RBP14.48□□□□□ -0.09
SGCE-204ENST00000428696 CRADDP78560 199 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 ARHGAP8P85298 464 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 CDK3Q00526 305 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 C1orf61Q13536 156 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 PTK6Q13882 451 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 SUZ12Q15022 739 aaKnown RBP14.48□□□□□ -0.09
SGCE-204ENST00000428696 CHRNA6Q15825 494 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 WHAMMP3Q1A5X7 153 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 RSPO4Q2I0M5 234 aaPredicted RBP14.48□□□□□ -0.09
SGCE-204ENST00000428696 ZNF648Q5T619 568 aaPredicted RBP14.48□□□□□ -0.09
SGCE-204ENST00000428696 IZUMO3Q5VZ72 239 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 MACC1Q6ZN28 852 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 SYDE1Q6ZW31 735 aaPredicted RBP14.48□□□□□ -0.09
SGCE-204ENST00000428696 MAATS1Q7Z4T9 603 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 KLHDC8BQ8IXV7 354 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 OXR1Q8N573 874 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 PPHLN1Q8NEY8 458 aaKnown RBP14.48□□□□□ -0.09
SGCE-204ENST00000428696 OR56A4Q8NGH8 313 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 LMX1AQ8TE12 382 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 CPT1BQ92523 772 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 WDR92Q96MX6 357 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 FAM96AQ9H5X1 160 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 CYP4F12Q9HCS2 524 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 IL26Q9NPH9 171 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 MRPL40Q9NQ50 206 aaKnown RBP14.48□□□□□ -0.09
SGCE-204ENST00000428696 CASS4Q9NQ75 786 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 EIF2B3Q9NR50 452 aaKnown RBP14.48□□□□□ -0.09
SGCE-204ENST00000428696 BFARQ9NZS9 450 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 FKBPLQ9UIM3 349 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 NEU2Q9Y3R4 380 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 TNRC6BQ9UPQ9 1833 aaKnown RBP14.47□□□□□ -0.09
SGCE-204ENST00000428696 ZNF292O60281 2723 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.47□□□□□ -0.09
SGCE-204ENST00000428696 A0A1B0GTQ1 180 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 FADS2P1A8MWK0 482 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 H3BM21 787 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 AP3B1O00203 1094 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 TNFP01375 233 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 PYGLP06737 847 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 MYCLP1P12525 358 aaPredicted RBP14.47□□□□□ -0.09
SGCE-204ENST00000428696 TPSB2P20231 275 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 ADRA1DP25100 572 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 MGAT1P26572 445 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 DEKP35659 375 aaKnown RBP14.47□□□□□ -0.09
SGCE-204ENST00000428696 TRIM23P36406 574 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 PI4KAP42356 2102 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 NPY2RP49146 381 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 CCT8P50990 548 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 CDK16Q00536 496 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 DHX34Q14147 1143 aaKnown RBP14.47□□□□□ -0.09
SGCE-204ENST00000428696 TPSAB1Q15661 275 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 ZNF423Q2M1K9 1284 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 ATP13A5Q4VNC0 1218 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 HENMT1Q5T8I9 393 aaKnown RBP14.47□□□□□ -0.09
SGCE-204ENST00000428696 ZDHHC20Q5W0Z9 365 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 ADAMTSL4Q6UY14 1074 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 PPIL6Q8IXY8 311 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 DNAJC1Q96KC8 554 aaKnown RBP14.47□□□□□ -0.09
SGCE-204ENST00000428696 ZSCAN5AQ9BUG6 496 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 TEX101Q9BY14 249 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 CDH19Q9H159 772 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 TCEAL2Q9H3H9 227 aaPredicted RBP14.47□□□□□ -0.09
SGCE-204ENST00000428696 ERVMER34-1Q9H9K5 563 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 KLF15Q9UIH9 416 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 DOLKQ9UPQ8 538 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 GPSM3Q9Y4H4 160 aa14.47□□□□□ -0.09
SGCE-204ENST00000428696 ADAMTS9Q9P2N4 1935 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 HEATR9A2RTY3 570 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 EFCAB8A8MWE9 144 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 FFAR2O15552 330 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 LDB2O43679 373 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 PPFIA2O75334 1257 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 MTX2O75431 263 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 CSF2P04141 144 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 HADHAP40939 763 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 GNPDA1P46926 289 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 HNRNPKP61978 463 aaKnown RBP eCLIP14.46□□□□□ -0.091e-10■■■■■ 35.6
SGCE-204ENST00000428696 EIF2B5Q13144 721 aaKnown RBP14.46□□□□□ -0.09
SGCE-204ENST00000428696 LAMB3Q13751 1172 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 KCNJ11Q14654 390 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 SKIDA1Q1XH10 827 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 ALG11Q2TAA5 492 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 PRRT3Q5FWE3 981 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 ZRANB3Q5FWF4 1079 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 TAS2R42Q7RTR8 314 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 PCGF5Q86SE9 256 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 NLRP8Q86W28 1048 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 RAVER1Q8IY67 606 aaKnown RBP14.46□□□□□ -0.09
SGCE-204ENST00000428696 PHACTR4Q8IZ21 702 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 RBFAQ8N0V3 343 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 TRAM1L1Q8N609 369 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 MNS1Q8NEH6 495 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 OR6P1Q8NGX9 317 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 ZNF398Q8TD17 642 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 NETO1Q8TDF5 533 aa14.46□□□□□ -0.09
SGCE-204ENST00000428696 OR1E3Q8WZA6 343 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms