RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 PCDH9Q9HC56 1237 aa10.23□□□□□ -0.77
ZNF3-208ENST00000428683 UVRAGQ9P2Y5 699 aa10.23□□□□□ -0.77
ZNF3-208ENST00000428683 ZNHIT2Q9UHR6 403 aa10.23□□□□□ -0.77
ZNF3-208ENST00000428683 PCDHGA7Q9Y5G6 932 aa10.23□□□□□ -0.77
ZNF3-208ENST00000428683 HEY1Q9Y5J3 304 aa10.23□□□□□ -0.77
ZNF3-208ENST00000428683 COL27A1Q8IZC6 1860 aaPredicted RBP10.23□□□□□ -0.77
ZNF3-208ENST00000428683 BPTFQ12830 3046 aa10.23□□□□□ -0.77
ZNF3-208ENST00000428683 KIF26BQ2KJY2 2108 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 PRAMEF33A0A0G2JMD5 474 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 LRRD1A4D1F6 860 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 NVLO15381 856 aaKnown RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 AKR1B10O60218 316 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 PRAMEF10O60809 474 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 ATP1A1P05023 1023 aaKnown RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 TPM3P06753 285 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 CCL4P13236 92 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 TNNT1P13805 278 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 ZNF30P17039 623 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 MX2P20592 715 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 CD1CP29017 333 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 HNRNPH3P31942 346 aaKnown RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 STC1P52823 247 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 QPCTQ16769 361 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 ASTE1Q2TB18 679 aaPredicted RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 PYCR3Q53H96 274 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 NPNTQ6UXI9 565 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 ADAMTSL4Q6UY14 1074 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 CHST15Q7LFX5 561 aaPredicted RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 NLRP8Q86W28 1048 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 ZNF761Q86XN6 746 aaPredicted RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 JPH3Q8WXH2 748 aaPredicted RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 TTC9Q92623 222 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 FAF2Q96CS3 445 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 MLPHQ9BV36 600 aaPredicted RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 MAK16Q9BXY0 300 aaKnown RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 CDH19Q9H159 772 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 SPTLC3Q9NUV7 552 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 HAUS2Q9NVX0 235 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 ZNHIT6Q9NWK9 470 aaKnown RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 DTLQ9NZJ0 730 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 FOXJ2Q9P0K8 574 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 AKAP7Q9P0M2 348 aaPredicted RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 AMACRQ9UHK6 382 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 PCYT1BQ9Y5K3 369 aaPredicted RBP10.22□□□□□ -0.77
ZNF3-208ENST00000428683 LOC400499M0QZD8 3231 aa10.22□□□□□ -0.77
ZNF3-208ENST00000428683 ANKRD36A6QL64 1941 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 IGHV5-10-1A0A0J9YXX1 117 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 C1orf232A0A0U1RR37 186 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 CAPN8A6NHC0 703 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 ANKRD66B4E2M5 251 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 C9orf172C9J069 976 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 ZW10O43264 779 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 EML2O95834 649 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 MMP2P08253 660 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 TMEM253P0C7T8 217 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 CA4P22748 312 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 AP1B1Q10567 949 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 ZBTB17Q13105 803 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 PEX6Q13608 980 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 GALNT3Q14435 633 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 ZNF648Q5T619 568 aaPredicted RBP10.21□□□□□ -0.77
ZNF3-208ENST00000428683 ALG1LQ6GMV1 187 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 ZNF765Q7L2R6 523 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 VASH2Q86V25 355 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 GALNT13Q8IUC8 556 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 NRSN1Q8IZ57 195 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 PLD5Q8N7P1 536 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 CNTD1Q8N815 330 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.21□□□□□ -0.77
ZNF3-208ENST00000428683 SNRNP27Q8WVK2 155 aaKnown RBP10.21□□□□□ -0.77
ZNF3-208ENST00000428683 TMEM159Q96B96 161 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 RNF25Q96BH1 459 aaPredicted RBP10.21□□□□□ -0.77
ZNF3-208ENST00000428683 HDAC11Q96DB2 347 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 SCARF2Q96GP6 870 aaPredicted RBP10.21□□□□□ -0.77
ZNF3-208ENST00000428683 COX14Q96I36 57 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 CCDC74BQ96LY2 380 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 ZNF830Q96NB3 372 aaPredicted RBP10.21□□□□□ -0.77
ZNF3-208ENST00000428683 WDR24Q96S15 920 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 FAM83DQ9H4H8 585 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 ARFGAP3Q9NP61 516 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 KCNK4Q9NYG8 393 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 TMEM9Q9P0T7 183 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 SEPT10Q9P0V9 454 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 CNOT6Q9ULM6 557 aaKnown RBP10.21□□□□□ -0.77
ZNF3-208ENST00000428683 HYOU1Q9Y4L1 999 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 PCDHB11Q9Y5F2 797 aa10.21□□□□□ -0.77
ZNF3-208ENST00000428683 OAS3Q9Y6K5 1087 aaKnown RBP10.21□□□□□ -0.77
ZNF3-208ENST00000428683 IGHV1OR21-1A0A087WYE8 117 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 SSU72P8A0A1W2PR75 194 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 A8MU76 341 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 FADS2P1A8MWK0 482 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 APOL1O14791 398 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 CBFA2T2O43439 604 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 SNX2O60749 519 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 DNAJC6O75061 913 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 PYGLP06737 847 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 PIRTP0C851 137 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 LIPCP11150 499 aa10.2□□□□□ -0.78
ZNF3-208ENST00000428683 FGF3P11487 239 aaPredicted RBP10.2□□□□□ -0.78
ZNF3-208ENST00000428683 MAN1A1P33908 653 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms