RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SPRY4Q9C004 299 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 ABCG8Q9H221 673 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 FANCLQ9NW38 375 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 MAN2B2Q9Y2E5 1009 aa18.2■□□□□ 0.5
UPK3BP1-201ENST00000428678 ICE1Q9Y2F5 2266 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 CLEC18AA5D8T8 446 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 LGALS16A8MUM7 142 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 STK17BO94768 372 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 PGLSO95336 258 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 EML2O95834 649 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 PEX11BO96011 259 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 MAPK9P45984 424 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 NOP2P46087 812 aaKnown RBP18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 HCAR3P49019 387 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 ZNF135P52742 658 aaPredicted RBP18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 MC1RQ01726 317 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 HHEXQ03014 270 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 UBXN1Q04323 297 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 ABHD18Q0P651 414 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 NFATC2Q13469 925 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 LRP8Q14114 963 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 ATP1A1-AS1Q5TC04 95 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 C16orf46Q6P387 395 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 WDR74Q6RFH5 385 aaPredicted RBP18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 CLEC18BQ6UXF7 455 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 ARHGAP22Q7Z5H3 698 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 PSTKQ8IV42 348 aaKnown RBP18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 CLEC18CQ8NCF0 446 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 ANKRD20A12PQ8NF67 263 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 SCAMP4Q969E2 229 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 SPENQ96T58 3664 aaKnown RBP18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 ZPBPQ9BS86 351 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 TRIM7Q9C029 511 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 ZWILCHQ9H900 591 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 APMAPQ9HDC9 416 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 KLHL3Q9UH77 587 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 PLAAQ9Y263 795 aa18.19■□□□□ 0.5
UPK3BP1-201ENST00000428678 TMEM191CA6NGB0 347 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 H3BRJ5 948 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 ASMTLO95671 621 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 CCDC172P0C7W6 258 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 FERP16591 822 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 TCN2P20062 427 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 SEPT6Q14141 434 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 LRRC66Q68CR7 880 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 PLEKHA7Q6IQ23 1121 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 PPP1R2P3Q6NXS1 205 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 TMCO3Q6UWJ1 677 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 FAM26EQ8N5C1 309 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 ATPAF2Q8N5M1 289 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 NSMCE1Q8WV22 266 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 TRIT1Q9H3H1 467 aaKnown RBP18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 STN1Q9H668 368 aaKnown RBP18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 FBXO8Q9NRD0 319 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 ETNK2Q9NVF9 386 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 ZNHIT2Q9UHR6 403 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 CENPEQ02224 2701 aa18.18■□□□□ 0.5
UPK3BP1-201ENST00000428678 PRR19A6NJB7 356 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 INPP4BO15327 924 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 MAFKO60675 156 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 AMPD1P23109 780 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 ARL4AP40617 200 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 MMP13P45452 471 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 RALGPS1Q5JS13 557 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 MARC1Q5VT66 337 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 NDUFAF2Q8N183 169 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 PIH1D2Q8WWB5 315 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 SMIM14Q96QK8 99 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 SARS2Q9NP81 518 aaKnown RBP18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 PPIL1Q9Y3C6 166 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 PRKAB1Q9Y478 270 aa18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 TMEM184BQ9Y519 407 aaPredicted RBP18.17■□□□□ 0.5
UPK3BP1-201ENST00000428678 POLR1CO15160 346 aaPredicted RBP18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 LRCH4O75427 683 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 PYGLP06737 847 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 PDHA1P08559 390 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 STAT5AP42229 794 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 CHST15Q7LFX5 561 aaPredicted RBP18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 EXD1Q8NHP7 514 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 SH3KBP1Q96B97 665 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 ERGIC2Q96RQ1 377 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 AGAP2Q99490 1192 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 RIOK2Q9BVS4 552 aaKnown RBP18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 NT5MQ9NPB1 228 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 TBC1D29Q9UFV1 150 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 LIMA1Q9UHB6 759 aaKnown RBP18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 KCNK6Q9Y257 313 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 TP53TG5Q9Y2B4 290 aa18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 MRPS18BQ9Y676 258 aaKnown RBP18.16■□□□□ 0.5
UPK3BP1-201ENST00000428678 BLACEA4D250 179 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 SNX2O60749 519 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 DLGAP3O95886 979 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 NR1D1P20393 614 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 EPHB1P54762 984 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 CDH6P55285 790 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 PTSQ03393 145 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 ITKQ08881 620 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 KLRB1Q12918 225 aa18.15■□□□□ 0.5
UPK3BP1-201ENST00000428678 SMTNL2Q2TAL5 461 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms