RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 H7C0S8 307 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 SLC31A1O15431 190 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 CD3EAPO15446 510 aaKnown RBP7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 SHBGP04278 402 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 F7P08709 466 aaPredicted RBP7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 GM2AP17900 193 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 PSMA3P25788 255 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 HOXA6P31267 233 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 FOXN2P32314 431 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 SLC1A2P43004 574 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 GPR1P46091 355 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 CCR5P51681 352 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 PTPN5P54829 565 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 MPP1Q00013 466 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 NFATC2Q13469 925 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 PEX6Q13608 980 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 ITGA9Q13797 1035 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 STAT4Q14765 748 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 CASP8Q14790 479 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 LRRC14Q15048 493 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 IRF4Q15306 451 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZNF449Q6P9G9 518 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 HDXQ7Z353 690 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 BMP8AQ7Z5Y6 402 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 SNX20Q7Z614 316 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 TECPR1Q7Z6L1 1165 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 SDCCAG8Q86SQ7 713 aaPredicted RBP7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 LDB1Q86U70 411 aaPredicted RBP7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 DENND6AQ8IWF6 608 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 CBARPQ8N350 705 aaPredicted RBP7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 TRAM1L1Q8N609 369 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 FRMD1Q8N878 549 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 OR2W6PQ8NHA6 318 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 GDAP1Q8TB36 358 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 CALML6Q8TD86 181 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 ANKRD7Q92527 254 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 ULK4Q96C45 1275 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 RUFY1Q96T51 708 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 AGAP2Q99490 1192 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 C19orf43Q9BQ61 176 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZSCAN5AQ9BUG6 496 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 C1QTNF2Q9BXJ5 285 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 ABCG8Q9H221 673 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 C6orf106Q9H6K1 298 aaPredicted RBP7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 ASB8Q9H765 288 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 FZD3Q9NPG1 666 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 KCTD5Q9NXV2 234 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 WSB2Q9NYS7 404 aaPredicted RBP7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 MOCS1Q9NZB8 636 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 MARCH4Q9P2E8 410 aaPredicted RBP7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 RABGEF1Q9UJ41 708 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZFR2Q9UPR6 939 aaKnown RBP7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 PLAAQ9Y263 795 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 IKBKGQ9Y6K9 419 aa7.87□□□□□ -1.15
HMGA1P4-201ENST00000428643 TECTAO75443 2155 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 UBA6A0AVT1 1052 aaPredicted RBP7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 FADS2P1A8MWK0 482 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 CXorf49A8MYA2 514 aaPredicted RBP7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 K7ESM1 405 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 GAPDHSO14556 408 aaPredicted RBP7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 PFDN6O15212 129 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 INPP4BO15327 924 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 LATO43561 262 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 UGT1A9O60656 530 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 NDUFS3O75489 264 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 PAK4O96013 591 aaPredicted RBP7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 PYGLP06737 847 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 INHBAP08476 426 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 NUDT17P0C025 328 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 PRSS56P0CW18 603 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 TDGF1P13385 188 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 UGT1A6P19224 532 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 OGNP20774 298 aaKnown RBP7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 BCKDHBP21953 392 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 UGT1A1P22309 533 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 UGT1A4P22310 534 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 AVPR2P30518 371 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 AKT1P31749 480 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 AKT2P31751 481 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 UGT1A3P35503 534 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 UGT1A5P35504 534 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 MSH2P43246 934 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 ABCG1P45844 678 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 SLCO1A2P46721 670 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 TTPAP49638 278 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 CDKN1CP49918 316 aaPredicted RBP7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 XIAPP98170 497 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 CREB5Q02930 508 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 CTBP1Q13363 440 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 NAB1Q13506 487 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 FGL2Q14314 439 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 SEMA3AQ14563 771 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 DBN1Q16643 649 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 TYSND1Q2T9J0 566 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 WSCD2Q2TBF2 565 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 GPR33Q49SQ1 333 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 ATP13A5Q4VNC0 1218 aa7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 HENMT1Q5T8I9 393 aaKnown RBP7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 RNF187Q5TA31 235 aaPredicted RBP7.86□□□□□ -1.15
HMGA1P4-201ENST00000428643 PSAPL1Q6NUJ1 521 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms