RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 GALNT13Q8IUC8 556 aa17.31■□□□□ 0.36
DDR1-235ENST00000428153 SFRP1Q8N474 314 aa17.31■□□□□ 0.36
DDR1-235ENST00000428153 PTCD2Q8WV60 388 aaKnown RBP17.31■□□□□ 0.36
DDR1-235ENST00000428153 CCDC74BQ96LY2 380 aa17.31■□□□□ 0.36
DDR1-235ENST00000428153 NUP85Q9BW27 656 aa17.31■□□□□ 0.36
DDR1-235ENST00000428153 TDRD1Q9BXT4 1180 aaKnown RBP17.31■□□□□ 0.36
DDR1-235ENST00000428153 CLMPQ9H6B4 373 aa17.31■□□□□ 0.36
DDR1-235ENST00000428153 WDR70Q9NW82 654 aa17.31■□□□□ 0.36
DDR1-235ENST00000428153 MAST4O15021 2626 aa17.31■□□□□ 0.36
DDR1-235ENST00000428153 ZFC3H1O60293 1989 aaKnown RBP17.3■□□□□ 0.36
DDR1-235ENST00000428153 RGSL1A5PLK6 1076 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 B4E171 279 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 SLC28A2O43868 658 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 MFSD11O43934 449 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 FGF3P11487 239 aaPredicted RBP17.3■□□□□ 0.36
DDR1-235ENST00000428153 CCL4P13236 92 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 CTPS1P17812 591 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 MX2P20592 715 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 CSTF2P33240 577 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDR1-235ENST00000428153 PBX1P40424 430 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 TSPAN7P41732 249 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 POLD2P49005 469 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 ZBED6P86452 979 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 PDK2Q15119 407 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 NCBP2-AS2Q69YL0 99 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 MAP7D3Q8IWC1 876 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 RCBTB1Q8NDN9 531 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 PATE1Q8WXA2 126 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 EXTL1Q92935 676 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 TEFMQ96QE5 360 aaKnown RBP17.3■□□□□ 0.36
DDR1-235ENST00000428153 FAM117AQ9C073 453 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 SUDS3Q9H7L9 328 aaPredicted RBP17.3■□□□□ 0.36
DDR1-235ENST00000428153 RMI1Q9H9A7 625 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 KCNK4Q9NYG8 393 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 HEMK1Q9Y5R4 338 aaPredicted RBP17.3■□□□□ 0.36
DDR1-235ENST00000428153 SDK2Q58EX2 2172 aa17.3■□□□□ 0.36
DDR1-235ENST00000428153 WISP1O95388 367 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 ITGB6P18564 788 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 TPM4P67936 248 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 KCNC4Q03721 635 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 ITKQ08881 620 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 SRSF6Q13247 344 aaKnown RBP17.29■□□□□ 0.36
DDR1-235ENST00000428153 DPYSL3Q14195 570 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.29■□□□□ 0.36
DDR1-235ENST00000428153 ALKBH5Q6P6C2 394 aaKnown RBP17.29■□□□□ 0.36
DDR1-235ENST00000428153 DOK6Q6PKX4 331 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 VASH2Q86V25 355 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 AVL9Q8NBF6 648 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 SCAMP4Q969E2 229 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 NKD1Q969G9 470 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 FAF2Q96CS3 445 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 FUCA2Q9BTY2 467 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 STN1Q9H668 368 aaKnown RBP17.29■□□□□ 0.36
DDR1-235ENST00000428153 SARS2Q9NP81 518 aaKnown RBP17.29■□□□□ 0.36
DDR1-235ENST00000428153 RBM22Q9NW64 420 aaKnown RBP eCLIP17.29■□□□□ 0.362e-7■■■□□ 16.7
DDR1-235ENST00000428153 CD84Q9UIB8 345 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 CAPN11Q9UMQ6 739 aa17.29■□□□□ 0.36
DDR1-235ENST00000428153 A0A087X0T9 212 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 CAPN5O15484 640 aaPredicted RBP17.28■□□□□ 0.36
DDR1-235ENST00000428153 DUX1O43812 170 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 DNAJC6O75061 913 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 PRLP01236 227 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 CD48P09326 243 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 FAM228BP0C875 321 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 SLC2A4P14672 509 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 CSF2RBP32927 897 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 ARSDP51689 593 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 NFATC3Q12968 1075 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 MMRN1Q13201 1228 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 PTPRRQ15256 657 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 ANKRD20A8PQ5CZ79 823 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 WDR74Q6RFH5 385 aaPredicted RBP17.28■□□□□ 0.36
DDR1-235ENST00000428153 RFLNAQ6ZTI6 216 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 OR10G6Q8NH81 332 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 ARRDC2Q8TBH0 407 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 ZNF564Q8TBZ8 553 aaPredicted RBP17.28■□□□□ 0.36
DDR1-235ENST00000428153 SLC37A2Q8TED4 501 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 SH3KBP1Q96B97 665 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 HDAC11Q96DB2 347 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 BTBD6Q96KE9 485 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 HERPUD2Q9BSE4 406 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 ADNPQ9H2P0 1102 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 EPB41L1Q9H4G0 881 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 PCDH9Q9HC56 1237 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 UVRAGQ9P2Y5 699 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 TMEM98Q9Y2Y6 226 aa17.28■□□□□ 0.36
DDR1-235ENST00000428153 OR5K4A6NMS3 321 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 KRT7P08729 469 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 MAN1A1P33908 653 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 UGT1A3P35503 534 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 CSRP3P50461 194 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 EPHA4P54764 986 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 DSC2Q02487 901 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 IHHQ14623 411 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 TBR1Q16650 682 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 DCAF12Q5T6F0 453 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 HENMT1Q5T8I9 393 aaKnown RBP17.27■□□□□ 0.36
DDR1-235ENST00000428153 NKAIN2Q5VXU1 208 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 KCTD6Q8NC69 237 aa17.27■□□□□ 0.36
DDR1-235ENST00000428153 AHCYL2Q96HN2 611 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms