RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 FAM83DQ9H4H8 585 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 HOMER3Q9NSC5 361 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 SMOXQ9NWM0 555 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 RIMKLBQ9ULI2 386 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 CHKBQ9Y259 395 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 U3KQA8 63 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 USP24Q9UPU5 2620 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 TDRD6O60522 2096 aaKnown RBP9.09□□□□□ -0.95
SMC1A-203ENST00000428014 ARHGEF17Q96PE2 2063 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-203ENST00000428014 C1orf232A0A0U1RR37 186 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 OR5K4A6NMS3 321 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 AGAP14A8MT82 685 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 NTN3O00634 580 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-203ENST00000428014 YY2O15391 372 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 VEGFDO43915 354 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 CTSEP14091 401 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 SLC2A4P14672 509 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 CD46P15529 392 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 GLB1P16278 677 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 ETV3P41162 512 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 GPR3P46089 330 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 GPR1P46091 355 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 FASLGP48023 281 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 DAB2P98082 770 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 OTUD4Q01804 1114 aaKnown RBP9.09□□□□□ -0.95
SMC1A-203ENST00000428014 ILF3Q12906 894 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMC1A-203ENST00000428014 FOXC1Q12948 553 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 LAMB3Q13751 1172 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 PRPSAP1Q14558 356 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 NR0B2Q15466 257 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 SLC1A5Q15758 541 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 PARP6Q2NL67 630 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 LRRC73Q5JTD7 316 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 MEI1Q5TIA1 1274 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 ENPP7Q6UWV6 458 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 NPNTQ6UXI9 565 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 PID1Q7Z2X4 250 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 ZNF438Q7Z4V0 828 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 HEATR4Q86WZ0 1026 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 ZNF567Q8N184 647 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 NETO2Q8NC67 525 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 PLA2G15Q8NCC3 412 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 LPCAT1Q8NF37 534 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 MYOCQ99972 504 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 CLPBQ9H078 707 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 GOLPH3Q9H4A6 298 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 EPB41L1Q9H4G0 881 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 FGF22Q9HCT0 170 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 UCKL1Q9NWZ5 548 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 KLHL8Q9P2G9 620 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-203ENST00000428014 PNMA8BQ9ULN7 279 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-203ENST00000428014 HYOU1Q9Y4L1 999 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 DNMT3AQ9Y6K1 912 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-203ENST00000428014 PLXNB3Q9ULL4 1909 aa9.09□□□□□ -0.95
SMC1A-203ENST00000428014 KMT2BQ9UMN6 2715 aaPredicted RBP9.09□□□□□ -0.95
SMC1A-203ENST00000428014 RP1P56715 2156 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 MACROD2A1Z1Q3 448 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 TMEM202A6NGA9 273 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 H7C0S8 307 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 AP3B1O00203 1094 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 CHUKO15111 745 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 HYAL3O43820 417 aaPredicted RBP9.08□□□□□ -0.96
SMC1A-203ENST00000428014 OPA1O60313 960 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 MAP3K6O95382 1288 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 CLDN7O95471 211 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 PCCBP05166 539 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 GSTM1P09488 218 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 MSNP26038 577 aaKnown RBP9.08□□□□□ -0.96
SMC1A-203ENST00000428014 ADRA1AP35348 466 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 WNT3AP56704 352 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 EIF3EP60228 445 aaKnown RBP9.08□□□□□ -0.96
SMC1A-203ENST00000428014 DYNLT1P63172 113 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 CCZ1BP86790 482 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 CCZ1P86791 482 aaPredicted RBP9.08□□□□□ -0.96
SMC1A-203ENST00000428014 GSTM4Q03013 218 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 ITGA9Q13797 1035 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 PYCR3Q53H96 274 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 ANKRD20A2Q5SQ80 823 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 PRAMEF14Q5SWL7 426 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 CERCAMQ5T4B2 595 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 SEL1L2Q5TEA6 688 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 CCDC181Q5TID7 509 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 ANKRD20A1Q5TYW2 823 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 ANKRD20A3Q5VUR7 823 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 KAZNQ674X7 775 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 KCTD11Q693B1 232 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 RAET1GQ6H3X3 334 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 WASH2PQ6VEQ5 465 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 THSD4Q6ZMP0 1018 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 TSPAN33Q86UF1 283 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 ZC3H18Q86VM9 953 aaKnown RBP9.08□□□□□ -0.96
SMC1A-203ENST00000428014 CHCHD4Q8N4Q1 142 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 LMX1AQ8TE12 382 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 HEXDCQ8WVB3 486 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 OR1E3Q8WZA6 343 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 NXPE2Q96DL1 559 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 ZNF514Q96K75 400 aaPredicted RBP9.08□□□□□ -0.96
SMC1A-203ENST00000428014 MRGPRX2Q96LB1 330 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 DEPDC7Q96QD5 511 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 WDR24Q96S15 920 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms